KEGG   Amyelois transitella (navel orangeworm): 106131873
Entry
106131873         CDS       T09957                                 
Name
(RefSeq) nipped-B-like protein
  KO
K06672  cohesin loading factor subunit SCC2
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:atra03036]
    106131873
Chromosome and associated proteins [BR:atra03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Adherin complex
    106131873
SSDB
Motif
Pfam: Nipped-B_C Cohesin_HEAT
Other DBs
NCBI-GeneID: 106131873
NCBI-ProteinID: XP_060800513
LinkDB
Position
5:complement(join(6314479..6314598,6315392..6315566,6317450..6317643,6317934..6318080,6318228..6318351,6318570..6318766,6318970..6319160,6319263..6319527,6319854..6320005,6320129..6320363,6320448..6320572,6320651..6320789,6320876..6321196,6321462..6322214,6322302..6322484,6322806..6323024,6323295..6323543,6323817..6324064,6324501..6324738,6325114..6325301,6325386..6325547,6325995..6326226,6326498..6326670,6327309..6327910,6328150..6328318,6329908..6329974))
AA seq 1955 aa
MNERDIPSVPVTTLAGVASLTDLLPVLPLPTPLPSTLNNKSQLFHPRVAEEAAILLATQD
ENLVTLLLQSLMQTSVQHIDLKDESIPNAVSPGPQQATPELLKAILHVNPNVFDQQQRNH
WGNNHLHSSKYNGMSPSGSYNYSPHSTVNSSPSSHGTAIHSAPIPNQQLLAPPCQSSPHV
NIGSPPSQSRPGMQVNITAQNNVSPLWNNANASNVYTSPLSNTSGSNSQNGGFFNSLGQD
SRNFGTNINEEKDPLSMSPRNQTDQQRLLMQSQDKAFEQGQSPAQASVAPSPLRLEPHVP
QPSMGAPYATPSDKQEPNRSANVTNNRYPVVKIGRLSEGILKKHEPSSEGRSRKNSTLES
DSDDNIPLKAKNYNTTTNEDKEREAIDIAREKNWEAVKRKHEEASKREEAEAAIVRPKLR
KIERRLVPVIEMLSIDELMESNTYQRFNKLIETVFETIDDDILITDEMEGTDIPEELLLP
RYQLQELCSEAAKLKNLSAMEAIPSDRLVRLLSILEKNIRAAEKMSLVGDPDDSEEMRQI
WMESALERVMCASDACLTALYIMTSANMPKRVFLEDVIDRIIMFIKFQLNNTIYCVYDPV
YSIQTTSKKKVDGRKRRGGGAGNVSRRSGTGSTRGVRELYTHAHESVTLLAELLHAHHLT
DTTVLHASTVGVSPFFVENVSELQLAALKLVTTIFTKYEQHRRLLLEDILASIARIPSSK
HNLRSFQLSSDQHIQMLTALVLQLVQCVVTLPETICKTQDKEKDKDKEQAEVDSKKHIDK
DLLIISKYEAAISVGGTFLTSFLNKCRSRSEEVDFRPLFENFVHDLLTTVNKPEWPATEL
LLSLLGTMLVKYMSDKTMEMPVRVASLEYLGLVAARLRRDSVHSRAKLSTMDAVVRDIRA
EEEKDGNQTQNLTSGLDEDEERTEFLQRVLLDYLAINGQKDQAWNCARHFYITQWYRDMV
VQPKASPTKSKSKHKSKKKYSKDETSDEESDADEDSDGGVKESKDKKHLTSSIMSAEKYK
TIERRKTFFLEKIRPFRYQGGSQVQVMQSYIDYSGAELISQYLASKRSFSQSFDRYLRKI
LVILCENTIAIRTKAMKCLAMIVEADPAVLARPDMQIGVNRSFLDQSTAVREAAVDLVGK
FVLSRPDLIDKYYGMLSSRILDTGVSVRKRVIKILKDICIECPEFPKIPEICVKMIRRVN
DEEGIRKLVMEVFQNMWFSPCANSSRPGNLDMTAATADPLTRKVLNITDVVISSRDMGLE
WFQQLLMSLFKPKEDKDDSTKIIYQPPKSLLVACQQIVDCLIENLLQLEESSAEGSSSSQ
RILACLSTLHLFAKIRPQLLVNHALTLQPYLSLKCQNQYEQQIMSTVASTLELVVPLMEH
PSEVFLAQLEEDAVKLILQRGQLVIASCIALLAAIVNNLTHNYKLIRDVFNKYHGVLLQW
KQSWQRNPDLTRSLPRPHFRRALFIVGLLLRYFDFTETKVIDGLPSDIKEQVYSNLMFFV
GLEDEDFVTHTLKALGSVCVRHYEFMLQPELKEFYHQLLTSDLAPIEMKADVLRNIEMYL
QEEEQRMIRQDKEWSKRSKLENLKEMGDVSSGMASTVIQLYLKQILGSFLHQSTVVRSSA
MKVVQLVLAQGLVHPVQIVPYLICMSTDTEVTVSHTADKNLQDIDKKYPGFIHMKAQLGI
KLSYQLQKILQSNSNDGVIRGFRKKDQDDLPTALNGFLYSLLRNTRPQRRALVLSLLKQF
DDVSTAPLDQMLYLADNLSYFPYQVQDEPLFIIHHIDIIISTSGSNLLQLFREGLLKTST
EEKEQMDEEEDDEEAETLLSRLPPTTRPLQDAMRQARGCLLLLVLKQHLKQLYGFTDAKI
NQYSPSESVKVYEKAVSRRHAPIFSPKATITQLGEAEHERELDDRGCRRLVDDYLEFKQL
MLKFDPEEEEDEEGAGEAEKPTSGAPPAPAPPAAT
NT seq 5868 nt   +upstreamnt  +downstreamnt
atgaatgagagggatattccgagtgtccctgtaactacattagcaggtgtcgccagtttg
acagacctgttaccagtgttacccctccctacacctttaccatcaacattgaacaataag
tcgcagcttttccatcctcgagttgctgaagaagcagctatattgctggcaacacaagat
gaaaacttagtcaccttattattacaatcgcttatgcaaacttcagtccagcatatagac
ctaaaagatgaaagcataccaaatgcagtgagccctgggcctcaacaagcaactcctgaa
ttattaaaagcaatcttacatgtgaatccaaatgtgtttgaccagcagcaaaggaaccac
tggggcaacaatcacttgcattcttctaaatataatggaatgtccccttctggttcatat
aattactcgccacacagtactgttaattccagtccatcttcccatggaactgccattcat
tctgcacccattccaaaccaacaattgttggcacctccatgccagtcctcaccacatgtc
aatattggttctccaccatcacaatctagaccaggaatgcaagtaaacatcaccgcccag
aataatgtgtctccattgtggaataatgccaatgcctctaatgtatacacaagcccttta
tcaaacacttcaggttctaactctcaaaatggtggttttttcaatagtttgggacaagac
agcaggaactttggtactaatataaatgaagaaaaggatcccctctctatgtcaccaaga
aatcaaactgatcaacaaagacttttaatgcaatctcaagataaagcttttgaacaaggc
caatcccccgcacaagcgagcgtggcgccgtcgcctctgaggctggagccgcacgtgccg
cagccgtcgatgggcgcgccctacgccacgccctccgacaaacaggaacccaacagaagc
gccaatgtcactaacaacagataccccgtcgttaaaattggtcggttatctgagggaata
ttaaagaaacacgaaccatcaagtgaaggacgatcaaggaaaaatagtacacttgaatcg
gattctgatgataatattccattaaaagcgaaaaattataatactacaacaaatgaagac
aaagagagggaagcaattgacatagctagagagaaaaattgggaggcagtgaagcggaaa
catgaagaagctagcaaaagggaggaagctgaagccgctattgttcggcccaagttacgg
aagattgaaagaagattggtacctgttatagaaatgttatcaatagatgaactgatggaa
tcaaatacataccaacggttcaataaattaattgaaacagtatttgaaacgattgacgac
gatattttgataacggatgaaatggaaggaacagatattcctgaagaacttttattacca
cgttatcaactccaagagttatgttcagaagcagctaaattaaagaatcttagtgcgatg
gaagcaattccttcagacagattagttcgattattaagtattttggaaaaaaatatcagg
gctgccgagaagatgtcacttgttggagaccctgacgatagtgaagagatgcgacagata
tggatggagtccgccttagaaagagtgatgtgcgcttcggacgcgtgtctgaccgccttg
tacataatgacctctgctaatatgcccaagcgcgtctttctagaggatgtcatagataga
atcattatgttcattaaatttcaactgaataacacgatttattgcgtttatgatcctgtg
tacagtatacaaactacgtctaaaaagaaagtggacgggcggaagcgtcgcggcggtggc
gcgggcaacgtgtcgcgtcgcagcggcactggctccacccgcggcgtgcgcgagctgtac
acgcacgcgcacgagagtgtgaccttactggccgagttacttcacgcccaccatctcacg
gacaccactgtactgcacgcgtccacggtcggcgtgtcgcccttcttcgtggaaaacgtc
agcgagctgcagttggcggcgctgaagcttgtgaccacgatattcacaaaatacgagcaa
caccggcggttattgttagaagatattctggcttcaatagcgcgtatcccgagctcaaaa
cataacttaagatcgtttcaacttagttcagatcagcacattcagatgttgacggcgctt
gttctacaactggtccaatgtgtcgtcacattaccggaaacgatatgcaagacccaagat
aaagaaaaagacaaagataaagaacaagcagaggttgacagcaaaaaacatatagacaaa
gaccttttaataatatcgaaatacgaagctgcaatcagtgtcggcggtacattcctcacg
tcattcttaaacaagtgccggagtcgatcagaagaggtggattttcggcccctgtttgag
aactttgtacacgatttgctgacaacagtgaacaaaccagagtggcctgccactgaactg
ctgcttagtctactgggaacgatgctggtaaaatacatgtcggacaaaactatggaaatg
cccgtgagagtggcgtcgctagagtacctgggactggtggcggcgcgactgaggcgggac
agcgtacactcgcgcgcgaaactttctaccatggacgccgtcgtcagagatatacgcgcc
gaggaagagaaggacggcaatcaaacacagaatttaacatcaggccttgatgaggacgaa
gagagaacggaatttctacagcgcgtactcctcgactatttggcgatcaatggtcagaaa
gatcaggcttggaactgcgcgcgacatttctacattacacagtggtaccgggatatggta
gtgcaaccgaaagcgtcccccaccaaaagtaaaagtaaacataagtcgaaaaaaaagtac
agcaaagacgaaaccagtgacgaagaatcggacgcggacgaggacagtgacggtggcgtc
aaagaatctaaagacaaaaaacacttaacgagctcaataatgtcggcagaaaagtacaaa
actatcgaaaggcggaagaccttcttcttagaaaagattcgaccgttcaggtatcagggc
ggctcgcaggttcaagtgatgcaatcgtacatcgactatagcggtgcggagttgatatct
cagtacttagcgtcgaagcggtcgttctcgcagagtttcgaccgttacttgcggaagata
ctggtgatactgtgcgagaacacgatagcgatccggacgaaagccatgaagtgcctggcg
atgatcgtggaggcggacccggcggtgctggcgaggccggacatgcagatcggcgtcaac
cgcagcttcctggaccagtccacggccgtgcgcgaggccgccgtcgacctcgtcggcaag
ttcgtgctcagccgccccgacctcatcgacaaatattacggcatgctttccagcaggata
ctggatactggcgtatctgtacggaagcgtgtgatcaagattctcaaagatatatgtatt
gaatgtccagagtttccaaaaatacccgagatctgtgttaaaatgataaggcgagtgaat
gacgaggagggtatccggaagctagtgatggaggtgtttcagaacatgtggtttagtccg
tgtgctaactcatcgcggcccggcaatttagatatgacggccgctactgccgatccgctc
actagaaaggtcctcaatatcacagacgttgtcatatcttccagagatatgggcttagaa
tggtttcaacagttgttaatgagcttattcaagccaaaagaggacaaggatgattctact
aaaataatctaccaaccgcctaaatcattattagtagcatgtcaacaaattgtggactgc
cttattgaaaatttgcttcagctagaagagtcgagtgcagaaggttcttcctcatctcaa
cgcattttagcgtgcctttccacattgcatttatttgcaaaaattagacctcagttgcta
gttaaccatgccttaacattacaaccatacttgagtttaaaatgtcagaatcaatatgag
caacaaataatgtcaacagtagcatcaactttagaactcgtagtgcctttaatggagcac
ccgagcgaagtgtttcttgcgcagcttgaagaagatgcagttaagttgatattgcaacgc
ggacagctggtcatcgcctcgtgtatagcgttactagcggcgatagtcaataacctgacg
cacaactataagctaattagagacgtatttaataaatatcacggtgtgcttctacaatgg
aaacaaagttggcagcgaaacccagatttaacccgatcactgccacggccgcattttagg
cgggcgctgtttatagtgggcttgctgcttcgatactttgacttcacagagactaaagtt
atagacgggctgccgagtgatataaaagagcaagtatattctaatttaatgtttttcgtg
ggtctggaagacgaggactttgtgacgcatacgctaaaggcgctcggttcagtttgcgtt
cggcattacgagttcatgttgcaaccagagctgaaagaattttatcaccaattactaacc
tcagacttagcgcctatagaaatgaaagccgatgtactaagaaacatcgaaatgtactta
caagaggaggaacaaaggatgatcagacaggataaggagtggtcaaagcgatcgaaactc
gagaacctcaaagaaatgggcgacgtatcctctggtatggcatcaacggtcatccagtta
tatttaaaacagatccttgggtcgttcctgcaccaaagcacagtagtgaggtctagtgca
atgaaagtggtgcaacttgtgctggcgcagggcttagtgcatcctgtacagattgtacct
tacttaatatgtatgagtacagatacagaagtgacggtatcgcacacggctgataaaaat
ttgcaagatattgataagaagtatccaggtttcatccacatgaaagcgcaattaggtata
aagctctcatatcagttacagaagatattgcaatcaaactcgaatgatggtgttataaga
ggatttaggaaaaaagaccaagacgacctaccaacagctctcaacggcttcttgtattcc
ttattacggaacacgcggccgcaaaggagagcattggtgttgtcgttactcaaacagttc
gacgatgtttccactgctcctttggatcaaatgttgtacctggcagataatttaagttac
ttcccatatcaagttcaagatgaaccactttttattatacaccacattgatattataata
tctacatctggatcgaatttattgcagctttttcgtgagggtttattaaaaaccagcacg
gaagagaaggagcaaatggacgaggaagaagacgacgaggaagccgagactctgctgtca
cgattgccgccgacaacgaggccgcttcaggacgccatgcgacaagctcgcggctgcttg
ctgctgctcgttttgaagcagcatctgaagcagctctatggtttcaccgacgcgaaaatt
aaccaatactctccgtcggaaagcgtgaaggtgtacgagaaggcggtgtcccgacggcac
gcgcccatcttctccccgaaggcgaccatcacgcagctcggggaggccgagcacgagcgc
gagctggacgaccgcggctgccggcggctcgttgacgactatttagagtttaagcagctc
atgctgaaattcgatccagaggaggaggaagacgaggagggggcgggcgaggcggagaag
ccgacgagcggcgcgccgcccgcgcccgcgccgcccgccgccacgtag

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