KEGG   Amyelois transitella (navel orangeworm): 106131878
Entry
106131878         CDS       T09957                                 
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein Ciao1 isoform X1
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:atra03036]
    106131878
   03400 DNA repair and recombination proteins [BR:atra03400]
    106131878
Chromosome and associated proteins [BR:atra03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    106131878
DNA repair and recombination proteins [BR:atra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     106131878
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C WDR90_beta-prop_4th NBCH_WD40 Beta-prop_Vps41 eIF2A WD40_RFWD3 Beta-prop_ELP1_1st PROPPIN Beta-prop_NUP159_NUP214 RMC1_N FZ_RECK DUF4910
Other DBs
NCBI-GeneID: 106131878
NCBI-ProteinID: XP_013186583
LinkDB
Position
5:complement(join(7328704..7329252,7329333..7329520,7329796..7330066))
AA seq 335 aa
MAKLELLQTLNGHKGIVWNVAWHPQGKIFASCGEDKTIKLWSKEGTEWKIKTVLVDGHQR
TIRQVAWSPCGNFLASASFDATTAIWDKKSGQFECNATLEGHENEVKSVAWSPSGQLLST
CGRDKSVWVWEVAGEDEYECESVLNVHNQDVKKVVWHPCLDILASASYDNTVKLYKEDPV
DNDWTCIATLQSHESTVWSLAFDKTGARLATCSDDKTVKIWKEYKPDNQEGVIVNDRESI
WKCVCTLSGYHSRCVYDIAWCHKTGLLVTACGDDIIRIFKESEESDPNAPTFELICTKLN
AHAQDVNCVTWNPNGSQELLSCSDDGEIKIWQFTE
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggcgaaattggaactgctacaaacattaaatggtcacaaaggcattgtctggaatgta
gcatggcaccctcagggtaaaatatttgcatcatgtggagaagacaaaactataaaacta
tggagtaaagaaggaactgaatggaagattaagacagttcttgtagatggacatcaacgc
acaataaggcaagtggcctggtcaccttgtgggaattttttggcatcggccagttttgat
gcaacaacagctatttgggataagaaaagtggtcagtttgaatgtaatgctacattagaa
ggccatgagaatgaagtcaaaagtgtagcttggtcaccatctggccagctgctgtcaaca
tgtgggagggacaaatcagtttgggtctgggaagtggccggggaagatgaatatgaatgt
gaatcagttttgaatgtgcacaatcaagatgtcaagaaagtagtttggcacccatgccta
gacatattggcctcagcctcatatgataacactgttaaactttataaggaagatccagta
gacaatgactggacatgtattgctactcttcaatcacatgagtccactgtatggagcttg
gcctttgataaaacaggtgcgagactagccacatgcagtgatgacaaaactgttaaaatt
tggaaagaatataaaccagacaaccaagagggtgtgatagtgaatgatagagaatcaatt
tggaaatgtgtttgtacattatcaggatatcactccagatgtgtttatgatatagcctgg
tgccacaagactggcttactagttactgcatgtggtgatgacattataagaatcttcaaa
gaatctgaggaatcagatccaaatgctccaacatttgaacttatttgtaccaaattgaat
gcccacgctcaggatgtcaactgtgtcacttggaacccgaatggcagccaagagctactt
tcctgtagtgatgatggagaaataaaaatatggcagtttacagaataa

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