Amyelois transitella (navel orangeworm): 106131957
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Entry
106131957 CDS
T09957
Name
(RefSeq) nuclear pore glycoprotein P62
KO
K14306
nuclear pore complex protein Nup62
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106131957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atra03019
]
106131957
Messenger RNA biogenesis [BR:
atra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106131957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Fib_alpha
Baculo_PEP_C
DUF1664
Motif
Other DBs
NCBI-GeneID:
106131957
NCBI-ProteinID:
XP_013186692
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All DBs
Position
26:join(4550819..4550888,4551019..4551075,4551215..4551334,4555951..4556069,4556933..4557002,4557346..4557470,4557990..4558146,4558500..4559198,4561225..4561309,4562285..4562450,4562688..4562857,4563187..4563298,4563857..4564015)
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AA seq
702 aa
AA seq
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MSFSFGSATTTSGGTFGTATPSTGFSFGGGDNKPAFGAAAATDNKPSFNFTSPTTSAPAF
GSFAFGGTKTTASASAAPASSLFSTATTAASSFGASKLSFGGFTSPPNQTVGSPGFGQPA
AQNAPPNLSFGGASTPQQQPAQTTQANTSFGSGSFSFGKPASAAAPAPGFNFATPTSGFS
ALPQANTATTTSQPAQSSFLASTSAPSFGATATSTFGQKSSFSFGGSTTPAFGTTTTTAA
PAFGTTNTGFGQVAAQLTSQPSFGTLGPTEPGLGISGTGFGNSGIGLATTGTGFGTTGTT
GTGFGTTATTGAGLGTTGTSFGTTGTTGTSLGTTGTSFGTTGTTGTSLGTTGTTGISFGA
TGTSRGTTGTSLTAGTGFGNTGTGLGTTGTSLGTTGSTGTTAQTGLSFGTTSFAATTTSS
GLSLSTSAPSSTGLGFASTKPSLSTGLSFGTTSAGGLSFGTKLTTATASSTATSTSAPSG
ITALGKTTTSATMPSLSTVTTTTAAPPAAISSITFAQLEENINKWTLELEEQEKTFINQA
TQINAWDRLLIANGEKIVELNDAVQTVKNSQESLEHELDFVLAQQKELEELLAPLEALLL
EDQAPADPEREHMYTLAENLDTQLRQMSEDLKEVIEHLNETNRSQDSNDPIVQIGRILNA
HMSSMQWIDNSIAQITTKLDQLKATHDTLRRDNERSFQLTYN
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgagttttagtttcggatcggcaacaactacttctggcggtacatttggtacagcaact
ccttctacagggttttcctttggtggcggggacaataaaccggcatttggtgcagcagca
gccacggataacaagccctcgttcaactttacgagcccaacaacaagtgctcctgcattt
gggagcttcgcatttggtggcaccaagaccactgcttccgcttctgccgctccagcatcg
tctcttttttcaacggcaacaacagctgcgtcttcgtttggggctagcaaactcagtttt
ggtggcttcacttcgcccccaaatcaaactgtaggcagcccagggtttggacagccagct
gctcagaatgccccaccaaacttatctttcggaggtgcctccactccacaacagcagccg
gcgcaaacaacacaagcaaacacatcattcggctccggttcgttctcgttcggcaaaccg
gcttctgctgctgcgcccgcgccgggttttaatttcgccacccccacttcgggattctca
gcgttaccacaagctaacactgcgacaaccacatcacaaccggcccagtcgagtttccta
gcttctacttcagcgccatctttcggtgcaaccgctacatctacttttggtcagaaatcc
tcattcagttttggtggttctactacgcctgcttttggtaccactactaccactgcagcg
ccagctttcggtacaaccaacaccggttttggtcaagttgccgctcagcttacttcgcaa
ccaagtttcgggactttgggacctactgaacctggccttggaatcagtggaactggtttc
ggcaattccggaattggcttggcaactaccggaactggttttggaactactggcaccact
ggaactggttttggaactactgcaaccactggagctggtttgggaactactggaactagt
tttggaactactggtaccactggaacaagtcttggaaccactggaactagttttggaact
actggtaccactggaactagtcttggaaccaccggaacgactggaattagttttggtgct
actggaacgagccggggaacaactgggactagcctaaccgccggaactggtttcggaaat
actggaaccggcctcggtaccacaggaactagcctcggaacaactggatctaccggaaca
acagcacaaaccgggcttagtttcggaactacaagttttgccgctaccacgacatctagc
gggcttagtttgtcaacttcagcgccctcctcgactgggcttggtttcgcatcgactaag
cccagtttaagcactgggcttagttttggaactacgagtgccggcgggcttagttttggt
actaagttgactactgccactgcgagttctactgctacatctacctcggccccgtctggt
ataacggctcttgggaaaactacaacatcagccactatgccatcgctgtcaacggtcaca
accacaacagcagcgcctcccgccgcgatatcgtccattaccttcgctcaattagaagaa
aatatcaacaaatggacgctagagttggaggaacaagagaagacgtttatcaaccaagcg
acgcagatcaacgcgtgggatagactgctcattgctaatggagagaagattgtagaacta
aacgacgccgtgcaaacagtgaagaactcacaggagagtttggaacacgagttggatttc
gttctagcgcagcagaaggagcttgaggagcttcttgcgccgctcgaagctctattgctg
gaggaccaagcgcccgccgaccccgagagagaacatatgtacacgttggcagaaaatcta
gacacgcagctgcggcaaatgtcggaagatctgaaggaggtcatagagcatttgaacgag
acgaacagaagtcaagatagtaatgatcctatcgtccaaatcggccgtatactgaacgct
cacatgtcgtcaatgcaatggatagacaactccattgctcagattacgacaaaactggac
cagttaaaggccacacacgatactttgagaagggacaacgagagatcattccagttgact
tataattaa
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