Amyelois transitella (navel orangeworm): 106132098
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Entry
106132098 CDS
T09957
Name
(RefSeq) exonuclease GOR isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106132098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atra03009
]
106132098
Ribosome biogenesis [BR:
atra03009
]
Eukaryotic type
Pre-60S particles
RNases
106132098
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF4834
WD40
PAM2
Motif
Other DBs
NCBI-GeneID:
106132098
NCBI-ProteinID:
XP_013186871
LinkDB
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Position
13:join(5472019..5472169,5476573..5476773,5502699..5503864)
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AA seq
505 aa
AA seq
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MGDINAGLNMNVFLLAGITLVVCVILHFIYKTIFGSKQKETSENATESNLDAPTEEAISE
TTAPEYKASGKSKKRAPWKGKTEFSHPWLLKNLKGHPGTVLLVDFSANGKFMAATCDESV
TTTADTGSIAERRPRIKNRERKSAPPARPPSPQSIFMEELAAALQSHLLSPKRMWELGYP
VEIEPNSTKAVMYINPPPQRKLFMSWDVNAPEFVPGSQNDSGRGSLGSTPPRSDSDEEAD
EVEHLCVRCDKVFHMTRDGEYLKQDFCSYHWGRVVERRYSCCGKSVGSTGCTLGRFHVWS
GTKPGMNGPIDGFVRARLPRGGVYALDTEMCYTTAGLELASVAVVAANGRLVYKTHVKPS
SPILCYNTRFSGIRPRDLERATKTLRDVQNDLLGFVGTDTILLGHALENDLRVLKLLHNA
VVDTCAMYPHARGFPMRRSLRALSEEFLGRNIQRSSAGHSALEDARTVMDLVLLKVNEER
AFRERLPISNEMHLLQPYDPLVNAA
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacattaacgccggtcttaacatgaatgtgttcctcttggcaggaattacctta
gttgtatgtgtaatattacactttatatacaagactatctttggaagcaagcaaaaggag
acatcagaaaatgcaacggagagtaatttggatgctccgaccgaagaggctatctcggag
actacagcgcctgaatacaaggccagtggaaagagtaaaaaacgtgcgccttggaagggc
aagaccgaattcagccatccttggctattgaagaatctcaaaggacatcctggaacggtt
ctccttgttgacttttctgctaacggaaagtttatggccgctacctgcgatgagagcgtc
acgacgacagcggacactggcagcatcgcagagcggcggccacgcatcaagaatcgagaa
cgaaagtcggcgccgccggcgcggccgccgtcaccgcagtccattttcatggaggaacta
gcagcagccctacaatcgcatcttctttcgcccaaacgtatgtgggagcttggttatcct
gtggaaatcgagccaaattctacaaaagctgtgatgtatataaacccgccgccgcaacgt
aaattattcatgtcttgggacgtcaatgcacccgagttcgtgcctgggtcgcaaaatgac
agtggcagaggatcgttgggttcgactccaccgcgctctgacagtgatgaagaagcggat
gaagtggaacatttatgtgtacgttgtgataaagtgtttcatatgactcgtgacggtgaa
tatttaaagcaggatttttgctcatatcactggggtcgtgtagtcgaaagacgctactcc
tgttgtggtaaaagtgttggatcgacaggttgcactttgggccgttttcatgtatggagc
ggaacaaagcctggaatgaatggaccaatcgacggttttgtacgggcacgcttgcctcgc
ggaggagtgtatgcgttagacacagagatgtgttacacaaccgcaggactggagttagcc
agtgtcgcggttgtagctgctaatggccgacttgtatacaaaacacacgtgaaaccaagt
tcgccaatactgtgttataacacccgattctcaggcatcaggccgcgagacttggagcgc
gcaactaagacgctacgagatgtacagaatgacctccttggatttgtgggcacggataca
atattgcttggacatgccctggaaaatgatctcagagtgttaaaattattgcacaacgca
gttgttgacacgtgtgcaatgtatcctcacgctagaggatttccgatgcgtcggtctctg
cgtgctctttctgaggaatttttaggacgaaacatacagcgtagcagtgcgggccattct
gctttagaagatgctcgtacggtaatggacttagtattgttgaaagtaaatgaagagcga
gcattcagagagcgccttccgatctcgaatgaaatgcatttgttgcaaccctatgatcct
ttagtcaatgccgcctaa
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