Amyelois transitella (navel orangeworm): 106132137
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Entry
106132137 CDS
T09957
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-B-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03013
Nucleocytoplasmic transport
atra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106132137
03015 mRNA surveillance pathway
106132137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atra03019
]
106132137
Messenger RNA biogenesis [BR:
atra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106132137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RBD_AKAP-17A
RRM_7
Motif
Other DBs
NCBI-GeneID:
106132137
NCBI-ProteinID:
XP_013186927
LinkDB
All DBs
Position
13:join(6036475..6036476,6036580..6036690,6037028..6037165,6037676..6037819,6037931..6038172,6039107..6039227,6039672..6039798)
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AA seq
294 aa
AA seq
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MARNKSPSAASDKEKKKPKENKKKKGDSGSSSSDSSGSSSESSSSRSSSRSSSSSSGSSS
RSSSSSSSSSSTSSNNDRSRPKKKTSPNKSPIKDRREGDRDKIRDRSPLGDKKKLSVPSA
NDKSKSKDKHERSPGRKKRERSPPPRPTRIHIGRLTLNVSREHIHEIFSTYGSVKAVEFP
MDRLHPHNGRGYAYVEFSNPDEAENAMKHMDGGQIDGQEITAAPVLIPSRPRRPSPRPPP
PRHAPIRRHSPPRYRRRSPPPRRRSPPRRRRSRSRSPRAAPRRRRSRSSSSSSR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggaataaatctccctcggcggcatcggataaagagaaaaagaagccgaaagag
aataaaaagaagaaaggtgattcagggtctagtagcagtgatagtagcggaagttcatca
gaaagcagttcatcaaggtcatcatctcgatcatcttcatctagttctggcagttcttct
cggtcttcatcatcgtccagttcttctagcagtaccagtagtaacaatgatcgttccagg
ccaaagaagaagacatctccaaacaagagccccataaaagatcgtcgtgaaggggataga
gataaaattagggacaggtcgcctttaggagataagaagaagctgtcagtgccctcggct
aatgacaaatctaagagcaaggataaacatgaaaggtctccagggcgtaaaaaacgtgaa
cgttcacctcccccaaggcccaccagaatccacattggcagattgactctgaatgtatcc
cgggaacatatccatgaaatattttccacctatggctctgtcaaggctgtagaattccca
atggatagattgcatcctcacaatgggcgaggctatgcttatgttgaattcagcaatcca
gatgaagcagaaaatgccatgaagcacatggatggagggcaaatcgacgggcaggagatc
acggcggcgcccgtgctgatcccgtcccggccgcggcgcccgtccccgcgcccgcccccg
ccacggcacgcgcccatacgacgacattcgccgcctaggtaccggcgccgcagcccgccg
ccgcgccgccgctcgccgccgcgccggcgccgctcgcggtcgcgctccccgcgcgccgcg
ccgcgcaggcgccgctccaggtcctcctcctcctcctcccgctaa
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