KEGG   Amyelois transitella (navel orangeworm): 106132399
Entry
106132399         CDS       T09957                                 
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
  KO
K12821  pre-mRNA-processing factor 40
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106132399
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:atra03041]
    106132399
Spliceosome [BR:atra03041]
 Complex A
  U1 snRNP components
   U1 related factors
    106132399
 Complex B
    106132399
SSDB
Motif
Pfam: FF WW WW_TCERG1 RhoGAP-FF1 WW_2 Cytomega_UL84 DUF4853
Other DBs
NCBI-GeneID: 106132399
NCBI-ProteinID: XP_013187253
LinkDB
Position
14:join(7975007..7975009,7975368..7975589,7976020..7976175,7976601..7976749,7977228..7977385,7977995..7978122,7978409..7978557,7978660..7978771,7979205..7979330,7979654..7979783,7980038..7980144,7980405..7980510,7980880..7981109,7981393..7981590,7981868..7981972,7982243..7982359,7982707..7982876,7983017..7983098)
AA seq 815 aa
MEPPNAGSPNLITSAPLLPPPMMGGMPPSLPQGVAMPPVPGLPPNLATLPPPMGFPPMLP
PFSMPPPGFPSFKPPDLNAPAPDVAPTANQSSPWSEHKAPDGRIYYYNSVTKQSLWEKPD
DLKTPAEKLLSSCVWKEYTTDAGRVYYHNIETKESSWVIPKELQEIKDKIAAEEAAQSMI
ADVPPPGEVPLPGSPAVGSGGSSALDEAMAKTLAAIDPTLANSIPIPEEIKPEEITAPPQ
IAGGDDAEKAPETQYKDKKEAIEAFKELLKDRNVPSNATWEQCVKIISKDPRYATFKKLN
EKKQAFNAYKTQKLKDEREEQRLKTKKNRENLEEFLLSCDRVTSITKYYKCEEMFSNLEI
WRCVPESDRRDIFEDCIFTITKREKEEAKALKKRNMKMLAQVLENMSEITYSSTWSEAQV
LLLENSAFKNDVSLLGMDKEDALIVFEQHIKNLETEYLQEREQIKKKNKRLQRKNRDNFL
ALLDSLHEEGKLTSMSLWVELYPVISADTRFSAMLGQSGSTPLDLFKFYVENLKARFHDE
KKVIKEILREKEFEVRPDTTFEEFATVVCEDSKSASLDAGNVKLTYNSLLEKAETKNKEK
LKEESKAQKKVESAFKWALSDANIDHQLSWSEVKEKLDLTAPEFEAVPNEEDRIRIYKDF
QHEQEESCMHYHHPKPRKSKRSKKKKRSHSASLSRSRSPSPVSRSATPQSWSSEDRKHKK
AKKKHRKHEPAPKSPTPEEGGITDDSPEPVRHKSKKSKRSAPSSPDNDTGDSHKPKKKKD
KKEKKEKERSTAWSDAELESRRAALLAQLHEHEAD
NT seq 2448 nt   +upstreamnt  +downstreamnt
atggaaccacccaatgcagggtctccgaacctgattacctcagcacctcttttgccccca
cccatgatgggtggtatgccaccatctttaccccaaggagtggcaatgcctccagtgcct
gggctaccaccgaatttggccacactgccaccacctatgggcttccctccaatgttgcca
ccgttttcaatgccacctccaggatttccatcatttaaaccaccggacttgaacgcgcca
gctcctgatgttgctccgactgctaaccaaagcagcccctggtcagaacacaaagctcct
gatggacgtatttattattacaactccgtcactaaacagagcctttgggagaaacctgat
gatttgaagacaccagccgagaaactgttatcttcatgtgtgtggaaggagtacacaaca
gatgcaggacgagtgtactatcacaatattgaaacaaaggagtctagttgggtgataccc
aaagagctgcaagaaatcaaagataaaatagcagcagaagaagctgcacagtctatgatc
gccgacgtccctccgccgggggaagttccccttccgggatcccccgccgtggggtccggg
ggaagttcagcactggatgaggcgatggctaaaaccctggcggccattgaccccactcta
gccaattctattcctatacctgaagaaataaaaccagaagaaattacggcccctccccaa
atagcgggaggtgacgacgcagagaaggcgcccgaaacgcagtataaagacaagaaagaa
gccattgaagctttcaaggaactactgaaagacaggaatgtaccatcgaatgcgacttgg
gagcaatgtgtcaagataatatctaaagatccccgctatgccactttcaagaaactcaat
gaaaagaagcaggccttcaatgcttataaaacacagaaattgaaagacgagagagaagaa
caaaggctgaaaacaaaaaagaaccgtgaaaatttagaagaatttttgttgagttgcgac
cgtgtgacgtccattacaaaatactacaaatgcgaagaaatgtttagcaatctcgagata
tggcgatgcgtccctgaatcggatcgtagggatatattcgaggactgcatcttcacgatc
accaagcgggagaaagaggaggctaaggcgttgaaaaaacggaacatgaaaatgttagcg
caggtactagagaatatgagtgaaattacatacagcagtacatggagcgaggcgcaggtt
ttactattagagaattctgcgttcaaaaacgacgtaagcctgttgggtatggacaaagag
gacgcgttaatcgtgttcgaacaacacatcaagaatttggaaacagaatatttgcaggag
cgagaacagattaaaaagaagaataagcgtttgcaacgaaagaatagggacaactttttg
gctctactcgatagtcttcacgaagaaggcaaactgacatcaatgtccttgtgggtggaa
ttatatcctgtgatttcggccgacacgaggttttctgctatgctcggtcaaagcggatcc
acgcctctggacttgttcaagttttacgttgagaatctgaaggctcgcttccacgacgag
aagaaggtcatcaaggagatattgagggagaaggagtttgaagtacgacctgacaccacc
ttcgaggagttcgccaccgtggtctgcgaggacagcaagtctgcctcgctggacgccggc
aacgtcaagctgacttataattctctgctggagaaggcggaaacaaagaataaggagaaa
ctgaaagaagaatcgaaggctcagaagaaagtggagagcgctttcaaatgggcgctgagt
gacgccaacatcgaccaccagttgtcgtggagcgaggtgaaggagaagctggatctcacc
gcgccggagttcgaggcggtgcccaatgaggaagaccgcatcagaatatacaaggacttc
caacacgagcaagaggagagttgcatgcactaccaccatccgaagccacggaagtcgaag
cgctccaagaagaagaagcggtcacactccgcctcattgtcgcgatctcgctcgccgtcg
ccggtgtcccggtcggcgacgccgcagtcgtggtcgtcggaggaccgcaagcacaagaag
gccaagaagaaacatcgcaaacacgagccagcgccgaaatctccgacgccagaagaaggt
ggtataacagacgactcgcccgagccggtgcgccacaagagtaagaaatctaagaggagt
gcgcctagcagccccgacaatgacactggcgactcacacaaacccaagaagaagaaggac
aagaaggaaaagaaagaaaaagaaaggtctacagcgtggtcggacgccgagctggagtcc
cggcgcgccgccctgctggcgcagctccacgagcacgaggccgactga

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