KEGG   Amyelois transitella (navel orangeworm): 106132451
Entry
106132451         CDS       T09957                                 
Name
(RefSeq) DDB1- and CUL4-associated factor 13
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:atra03009]
    106132451
   04121 Ubiquitin system [BR:atra04121]
    106132451
Ribosome biogenesis [BR:atra03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    106132451
Ubiquitin system [BR:atra04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     106132451
SSDB
Motif
Pfam: WD40 Sof1 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EIPR1 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_RFWD3 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_NUP159_NUP214 WD_LRWD1 eIF2A NBCH_WD40 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 MIOS_WD40
Other DBs
NCBI-GeneID: 106132451
NCBI-ProteinID: XP_013187329
LinkDB
Position
14:complement(join(7100499..7100750,7101312..7101612,7102008..7102174,7102255..7102799,7102968..7103046))
AA seq 447 aa
MSQVKVKVISRNPDDYIRSTKRDIHKLPRNYDPSLHPLEAPREYVRALNAVKLERVFAKP
FIGNLDGHSDGVSSLAKHPSRLAVLASGAFDGEIRLWDLAARKCTRHFIAHEGWVRALCY
SPNGDSFTSVGDDKTIKTWKSEIHSEEDEDPVNTLLSMSVVSGVSHHRSKPIFATCGEHC
QLWEKTRNEPIKVFKWGVDSLHHVAFNQVENNLLASCASDRSIILYDCRESGPLRKVVME
LRSNSLAWNPMEAFIFSVANEDYNLYTFDVRKLKQPVNIHMGHTSAVIDVDYAPTGRELV
SGSYDKTIRIFESLKGNSRDVYHTKRMQRLTCVKWTLDNKYILSGSDEMNIRMWKARASE
KLGVLKPRERTALNYSEALKEKFANHPQIRRIARHRHVPKHVYNAQKELKTIKEKTKRKD
ANRRAHSKPGAVPFVPERQKHIVKEDE
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgtctcaagtaaaagtgaaggttataagtcgcaaccccgacgactatattcgttctacg
aaaagggacattcataaattgccaagaaattatgaccctagtcttcatcccctggaggct
ccacgggaatatgtcagagctctaaatgctgttaaactagaaagagtgtttgccaaaccc
tttattgggaacttggatggccattctgatggagtttccagtttagcaaaacatccaagt
agattggcagtgttagccagtggtgcttttgatggggagatacgtctgtgggatttagca
gctcgtaaatgcactagacattttatagcacatgaaggttgggtacgggctctttgttat
tcaccaaatggagacagttttacaagtgttggtgatgataaaactataaaaacatggaaa
tctgagatccattctgaagaagatgaagatccagtgaatacattactgagtatgtcagta
gtgagtggtgtttctcatcatagatcaaagccaatatttgcaacatgtggagagcactgc
caattgtgggaaaaaacaaggaatgaaccaattaaagttttcaagtggggtgtagacagt
ttacatcatgtggccttcaatcaggtggagaacaacttactggcttcctgtgcaagtgat
agaagtataattctgtatgactgccgtgagtcaggtcctttgaggaaagtagtaatggaa
ttgagatccaattctctagcttggaaccctatggaggccttcatattcagtgtagcaaat
gaagattataatttgtacacatttgatgtgagaaaattgaaacaacctgtgaacatccac
atgggacatacatcagctgtcatagatgttgactatgctccaactggacgagaattggtc
tctggaagctacgataagacaatccgcatctttgagagcttgaaaggcaattctagggat
gtctaccacaccaaaaggatgcagaggctgacttgtgtcaagtggactttggacaataaa
tacatattatcaggctctgatgaaatgaacataagaatgtggaaagcaagagcttctgag
aaattgggcgttttgaagccacgcgagaggacagctcttaattactcagaagctttgaag
gagaaattcgcaaatcacccacaaataagacggatagcccgtcacaggcatgtccccaaa
catgtgtataatgctcagaaggaattgaagaccatcaaagaaaagactaagagaaaagac
gccaacagacgagcacacagcaagcctggagctgttccgtttgttccggaaagacagaaa
cacattgtcaaagaagacgagtga

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