Amyelois transitella (navel orangeworm): 106132463
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Entry
106132463 CDS
T09957
Name
(RefSeq) syntaxin-5
KO
K08490
syntaxin 5
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
106132463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atra04131
]
106132463
Membrane trafficking [BR:
atra04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
106132463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Bacillus_HBL
UPF0242
DUF7799
DUF4757
DUF16
Syntaxin
Motif
Other DBs
NCBI-GeneID:
106132463
NCBI-ProteinID:
XP_013187344
LinkDB
All DBs
Position
14:complement(join(7971069..7971527,7972010..7972218,7972332..7972746))
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AA seq
360 aa
AA seq
DB search
MLPRRRNLTSGSVTDRTSLLEFDNYDKLDKKGSSNSKPYKSVENHHNNQLSDRSYVEEEF
EFDFLQEFVFEAVMAARDRTNEFITAVRSLQGRTLARPVVRDERKAAVLETYSQFMSMAK
VISKNITSTYAKLEKLALLAKKKSLFDDRPTEIQELTYIIKGDLSSLNQQIAKLGEMPRG
RKSMHSHSSSVVVALQSRLASMSNQFKQVLEVRSENLKQQNSRREQFSRVTPIVSEVPSL
LQQDDVSIDFGESSLVQTQQFALRDDSDSYVQQRAETMHNIESTIVELGGIFQQLAHMVK
EQDEAIGRIDANIHDAEMNVEAGHREILKYFQNVTGNRALMFKVFGVLIFFFIFFVVVMA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgctacctcgtcgtcggaaccttacaagtgggagtgtaacagatcgaacttctttgcta
gaattcgataattacgataaattagataaaaagggttcctccaattcaaaaccttataag
tcagttgaaaaccatcataataatcaattatctgatagatcgtacgtggaagaagaattt
gaattcgatttcctacaagagtttgtgtttgaagcggtgatggctgcccgagacagaact
aatgaatttataacagctgtacgaagtcttcagggcaggacattagcaaggcccgttgtc
agagatgaaaggaaagctgctgtattggaaacttattcacaatttatgagtatggcgaaa
gtaattagtaaaaatatcacaagcacatacgctaagctggaaaaattagctttgttggca
aagaaaaaatctttatttgatgatcgacctacagagatccaagaactcacatatattatt
aaaggagatttaagttccttgaatcagcagattgcaaaactgggagagatgccgagaggc
cgcaagagtatgcacagtcattcatctagtgtcgttgttgccttgcagtcccgtttggcg
tcaatgagcaatcaattcaaacaggttctggaagtgcgatccgaaaacttgaagcaacaa
aatagtagaagagaacaattttcaagagtaacaccaatagtatcagaggttccatctcta
ttgcagcaagatgatgtgagcatagactttggtgaatcatcacttgtccaaacacaacag
tttgctctacgtgatgattcagattcatatgtgcagcagagagcggagactatgcacaac
atagaaagcactattgttgaacttggtggcattttccaacagttagcacatatggtgaag
gaacaagatgaggccatcggacggatagatgcaaacattcatgacgcagaaatgaatgta
gaggctgggcatagggagatattgaagtattttcaaaatgttactggcaatagagcactt
atgtttaaagtttttggggtattgatatttttcttcatattttttgttgttgtaatggct
taa
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