Amyelois transitella (navel orangeworm): 106132496
Help
Entry
106132496 CDS
T09957
Name
(RefSeq) zinc finger matrin-type protein 2
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106132496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atra03041
]
106132496
Spliceosome [BR:
atra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
106132496
Complex C
U4/U6.U5 tri-SnRNP related factors
106132496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_jaz
zf-met
zf-U1
C2H2-zf_KIN17
Herpes_gp350_A
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
106132496
NCBI-ProteinID:
XP_013187393
LinkDB
All DBs
Position
7:complement(join(6794980..6795219,6795939..6796180,6796488..6796602))
Genome browser
AA seq
198 aa
AA seq
DB search
MSMRPDDHRRKWDKDEFERIAAERLQAELDEEERSKKKAPPVKRELLKQRDYKVDLDSKL
GKSVVINRNTPTSQSGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMKIERSSLEQV
KARFALNKRKLEEKKTEYELDSRLREAAEEEARLKELRRERRRDKKRKLQDNEEEDDAPV
QSELAQIMGFSGFGGSKK
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgcgacctgatgatcatcgaagaaaatgggacaaagacgaattcgaaagaatt
gctgcggaaagacttcaagcagaattagatgaagaagagcgatccaaaaaaaaagctcct
cctgtcaaacgtgaacttctaaaacaaagagactacaaagtagacttggactccaaactt
ggcaagagtgtagttatcaacaggaacacacctacttcacaatcgggaggatactattgc
aatgtttgtgactgtgttgttaaagactctatcaactttttggaccacatcaatggaaag
aaacatcaaagaaaccttggcatgtctatgaaaattgaacgaagcagcttggagcaggtt
aaagccagatttgcactaaacaaaagaaaattggaagagaaaaaaactgagtatgaacta
gacagtcggttacgtgaggctgcagaagaggaagctcgtttgaaagagctccgtcgcgag
cgacgtcgtgataagaagcgcaagttacaggacaacgaggaggaagatgatgctccagtg
cagtcagagttggcacaaataatgggattctcgggctttggaggctcgaaaaagtaa
DBGET
integrated database retrieval system
