KEGG   Amyelois transitella (navel orangeworm): 106132538
Entry
106132538         CDS       T09957                                 
Name
(RefSeq) cell adhesion molecule Dscam2
  KO
K06767  Down syndrome cell adhesion molecule
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:atra04515]
    106132538
Cell adhesion molecules [BR:atra04515]
 Immunoglobulin superfamily
  Other
   106132538
SSDB
Motif
Pfam: Ig_3 I-set ig fn3 Ig_2 FN3_DSCAM-DSCAML_C V-set Pur_ac_phosph_N C2-set_3 C2-set_2 Ig_5 Fn3_VIN3 Sp38 Ig_RIMBP2 Receptor_2B4 Tissue_fac Arylsulfotran_N Ig_PDGFR_d4
Other DBs
NCBI-GeneID: 106132538
NCBI-ProteinID: XP_060805412
LinkDB
Position
19:join(5711142..5711178,5769919..5770037,5779800..5779998,5781481..5781636,5782725..5782856,5789708..5789843,5801600..5801787,5802724..5802996,5803470..5803574,5813421..5813565,5813764..5814026,5820486..5820647,5822295..5822594,5822952..5823071,5823343..5823516,5831713..5831863,5832212..5832362,5832776..5832905,5833287..5833454,5833812..5833942,5834311..5834521,5834708..5834854,5835278..5835433,5835724..5835863,5836243..5836399,5836686..5836863,5837171..5837361,5837609..5837794,5839427..5839563,5839681..5839837,5840061..5840201,5840414..5840569,5840813..5840970,5841115..5841187,5841962..5842120,5842497..5842662,5843739..5843892)
AA seq 1968 aa
MKFSSYLLLTILAVRVSPEPRRLPNIQEPQHHVEFSNDTGAMLSCGTRGDYELDWLLLDN
SPVTSLPGLRRVLLNGSLELAPFPADRYRRDIHATTYRCRIRFSGGFALLSRNVHVHAVI
NIPWEVHVPDEYVIAGNSAVLHCVVPAHCADRVDDVEWFTDDEISVLRYLGTKYQLLDDG
SLYISEVSPDDRYNTFRCRVRDRITRNLYSSQYFGHVIVTEPKGGVRPRVAVEARSRRVQ
AGQDVRLPCAAHAWPVPSYRWFRDHHEQLIPIEKTPLWQRASLLGGGLLSIQSVRREDSG
RFVCWLNNTVGVESVHFTLIVIETISVRVKPELLRTKINSDITFECKISGHPIELVYWVH
DARVLKTNDRVKITEEGLRLHIKNTQREDEGFYQCFGSNTKDQAYGIGEYVINVTEGRPR
TVANRSRRAPFARSSHTHDTDWNFTGTRESKPELVYWFSEQTLQPGPSVSLKCVAMGHPP
PQFTWLLDGFPIPTNPRFVVGQHVTLQDDVVSHLNISRVTEQDGGEYACVASNTAGKAIH
AARVNVYGLPYIREMPKVTAVAGSDLNIKCPVAGYPIESITWERDGQTLPLNRRQKVFPN
GTLIVEQTQRGEDAGTYTCQAANRQRHAARRDVEVQILVQPKILPIQPLTNLLREGMRAA
ISCQILEGDLPIAFRWEKNGQPVTSSPYAPSGIITRRMDEYSASLVIEHITSLHSGNYTC
IASNVAGSERFTVPLTVNVPPRWRLEPNDVAVAAGQDVTLQCQAEGYPKPAITWKKAVGN
TPGEYKDFMFEGSSRVLENGSLVFERVAKDSEGHYLCEARNDIGAGLSKLIFLKVNAPAR
FPMKSKTVQVTAGEAAHLQCAASGDAPLEVSWRSPHHHTIAHHLDQRYTIREQVLDDGLV
SELSILQTYRQDTGALTCRASNAYGQDEMLIHLVVQEVPEMPKNIRIIDQQSRSIQISWT
QPYAGNSPIINYIVQYKEAPEPWPTTPQKVIVPGSVTSASVQNLQPATSYHLRIIAENRL
GQSEPSQLVQVTTTEEVPSGPPLDVRVEAKSSTELIVSWEPPQRDLWNGNILGYYVGFQE
LNSNSTILSASGPGGASYTVRTVEGAGTARARTTLSGLQKHAAYAVVVQAYNSRGAGPAS
PPTTATTMEDVPSLPPGALQCTALSSQSVRVSWEQPPMRGRNGVVQGYRVTYAPVTDWYG
NEEAVTKQISGLHTTLSGLRRYTNYSVTVCAFTAAGDGVRAAPVYCHTEEDVPSAPADIK
AVVSSRNKILVSWLPPAAPNGVLVGYTLYMSVIEDGREEGTHKRMLSPSTLSHETARSPP
RATHQFWVSASTRLGEGEATRVVTVLPSDSVPARITSFSRSIVTPWKENISLSCNKVGFP
TPTTTWSMNGATLESTLRKNVTSDGTLIISMTQYADSGNYTCSVENAHGHDEVTYSVEVK
VPPQPPVLAVVDSYADSLHLQWSDQGDGGSPILGYVINYKREHGDWEELQVELGTSEHVL
PNLWCGTRYQLYITAFNRIGTGLPCDIVHAYTKGTVPVKPKHSQMITLNTTTVTVWLDSW
GDGGCGILYFVIEYREISQSQWRLVSNSVQATERVFSVTGLTPATQYQLRITAHNNAGHA
VALYNFTTHSLSGMLDGELSPPVPAAGSRSLGGARVILPAALSLLVLGALIAIVLLVRRN
KAGGTETVATESGVGESPSVAQLQNKVNRDQQYLAARAQHPPPQHHYKHASNEYIEDICP
YATFQLTKPTAYSESSYSGNVYSGPYHSVRGSFVYHDLKQNDKYKGKEPEYTKVRRKGNR
LRDPHSESQESDNLGSTDSEVKKILTLHLPITEYEDDASDDASAPHSDSEPAARLRPAHP
TTYPSVEREESSSSSENSIGGVVRKAFPSRKGKAGALGKRHVRSSSGYSSHNDETTFSIS
NYPSFNEHIHPPSRFSDDTECEGHHRRKRGPHPHPDGKITREAFQINV
NT seq 5907 nt   +upstreamnt  +downstreamnt
atgaagttcagttcgtatttgctgctcaccatcttggcagtacgcgtgtcaccagagccc
cgtcgcctgccaaacatccaggagccgcagcaccacgtggagttctccaatgacacaggc
gccatgctcagttgcggcaccaggggggactatgagctggactggcttctcctggacaat
tctcccgtgacgtcactgcccggtcttcggagggtcctgttgaacggttccctggagttg
gccccgttccctgctgaccggtatcggcgggatatccacgcaaccacgtacaggtgtagg
atcagattcagcggcgggtttgcgctgttgtccaggaatgtgcatgttcatgctgttatc
aacatcccttgggaagtccacgtgcccgacgagtatgtgatagctggcaactcagctgtt
ctacactgtgtcgtgccagcccactgcgcagacagagtggatgatgtggaatggtttact
gatgacgagatcagcgtccttagatatttaggtacaaaataccagctcctggacgatggc
tcgctgtacatcagcgaggtgagcccggacgaccggtacaacacgttccggtgtcgggta
cgggaccggattaccagaaatttgtactctagtcagtacttcggtcacgtaatcgtgacg
gaaccaaaaggcggcgtgaggccgcgggtagcagtggaggcgcggtcccgtcgggtgcaa
gccggacaggacgtccggctgccgtgcgcggctcacgcttggccggtgcccagttatagg
tggtttcgggatcaccacgagcagctaatacccatagagaaaacccctctgtggcagcgg
gctagtctactcggcggcggtctactcagtatccagagtgtgagaagagaagactccggg
agattcgtgtgctggctcaataacacagtaggagtggagtcagtccacttcacactcatt
gtcatagaaacgatctccgtccgtgtgaagcccgagctgctacgaacaaaaataaattcg
gacatcacatttgagtgcaaaatttctggacatcctattgaattggtctactgggtacac
gacgcaagagttttgaaaactaatgatagggtaaaaatcacggaagagggattaagacta
catatcaagaacacgcaaagagaagatgagggattttatcagtgttttggaagcaatacc
aaggatcaagcgtatggtattggagaatatgttataaatgtgaccgaaggccggccgcgg
actgtggcgaatcgctccaggcgtgcccctttcgcccgaagctcacatacacacgacacc
gactggaatttcactggaactagagaatctaaaccagagttagtgtactggttctccgag
caaactcttcagcctggacccagcgtatctctcaaatgtgtggccatgggtcatccacca
ccacagtttacgtggctactggatggatttcctataccaacaaatccaaggtttgtggtt
ggccaacacgtcactctacaagacgacgtcgtcagccatcttaacatcagcagagtaacc
gaacaagatggcggcgaatacgcctgtgtagcgtcaaacacagctgggaaggcgatacat
gcggcaagagtgaacgtgtatggactgccttacatcagagaaatgcccaaagtcacggct
gttgctggaagcgatttgaacatcaaatgcccagtagcgggttaccctatagagtctata
acatgggagcgagacgggcaaacactaccgctgaaccggcgtcagaaggtatttcccaat
gggactctcatcgtggagcaaactcagcgaggcgaagacgccggcacgtatacgtgccaa
gcggccaacaggcagcgacacgccgcccgcagggacgtcgaagtgcagatattagtccaa
ccgaaaatcttgccaattcagccgctcacgaacctactgcgggaaggaatgagggccgct
atatcttgccaaattctcgaaggtgacttgcctatcgcgtttcgatgggagaagaacggg
cagcccgtgacgtcatcgccgtatgcgcccagcggaataattactaggagaatggacgag
tatagtgcatcactggtcatagaacatataacttcgcttcatagcgggaattacacgtgc
atagcgtcaaatgtggctggttcggaaagatttacagtgccgctcacagttaacgttccg
cctcgatggcggttggagcccaacgacgtggcggtggcggcgggccaggacgtcactctg
cagtgccaggcagaaggctaccccaaacctgccattacgtggaagaaggctgtcggcaat
actccaggggagtacaaagacttcatgtttgaaggcagctcgagggttttggagaacggg
tccctggtcttcgagagagtagccaaagacagcgaaggacattacctatgtgaagccagg
aatgacataggtgctgggctaagcaaactgatatttttgaaagttaatgcgcctgcccgt
ttcccgatgaagagtaaaactgtccaagtgacggcaggggaggccgctcacctgcaatgt
gccgcttcaggggacgctcctcttgaagtcagctggaggagtccacatcatcacactata
gctcatcatttggatcaaaggtatactatacgagaacaagtgctggacgatggtttagtt
tccgagctcagcatattacaaacatacagacaggacaccggcgctctcacgtgtagagcg
tccaatgcctatggacaagacgagatgctcattcatttagttgtgcaagaggtaccagag
atgccgaaaaatattaggataatagatcaacagtcaaggtccattcaaatatcttggacc
caaccatatgcgggaaacagccccatcatcaactacattgtccagtacaaagaggctcca
gagccttggccaacaactcctcaaaaggtcatagttcccgggagtgtgacgtcagcaagc
gtacaaaatctgcagccggccacatcgtatcacctacgaatcattgctgagaacagacta
gggcaaagcgagccgagccaactggtgcaggtcaccacaactgaagaagtgccaagcggg
ccacctttagatgtaagagtagaagcaaaaagctcaacagagttgatagtgagttgggaa
ccgccacagcgagatctatggaatggaaatattctcggatattatgttggttttcaagag
ctcaacagcaacagcaccatactaagtgccagcggtccaggtggtgcatcatacacagtt
cgcactgtcgaaggcgcgggtacagccagggcccggaccacgctctcggggcttcagaaa
catgccgcatatgctgtcgtcgtgcaagcgtataatagtagaggagctggacccgcgtcg
cctcctactacagctactactatggaagatgtaccaagtcttccacccggagcccttcaa
tgcacagcactgagctcgcaatctgttcgggtatcgtgggagcagcccccgatgcgaggc
cggaatggcgtggtccagggttaccgagttacgtatgctcccgttactgattggtatggc
aatgaagaggcagtaaccaagcagatatcaggtctgcacacgacattatctggactgcga
cggtacaccaactactctgtgacagtctgcgcgtttaccgcggctggggatggcgttaga
gccgcaccagtttattgccataccgaagaagacgttccatcggcaccagctgacataaag
gcggtagtgtcatcgcgaaacaagatactcgtgtcatggctaccgcccgcggctccgaat
ggagtcctcgttggatacaccctgtatatgagtgtcattgaagatggtcgagaagaaggt
actcacaaacgaatgttgtctccgagcaccctgtctcacgagacagcgagatctccaccg
cgagccacacatcagttctgggtatcagctagcactagacttggtgaaggagaagctact
cgtgtggtcaccgttttgccttctgattctgttcccgcaagaataacatcattcagccgc
agcatagtgaccccgtggaaggagaacatttcgttatcgtgcaacaaagtggggttcccc
acgcccactaccacgtggagcatgaacggtgccactttagagtctaccttgcggaagaat
gttacttctgatggcactcttatcattagcatgacccaatacgcagacagcggtaactac
acatgttctgtggagaacgctcacggtcacgacgaggtcacgtacagcgtggaagtgaag
gttccgccccaaccgccggtgctggccgtcgtcgactcttacgcagactccttgcatctc
cagtggagcgaccagggcgatggaggcagccctattcttggctacgtgataaactataag
cgcgagcacggcgactgggaggagctgcaagtggagttggggacatcggagcacgtgctg
ccgaatctgtggtgcggcacgcggtaccagctgtacatcacggcgttcaatcgcatcggg
accggattgccatgcgatattgttcatgcctataccaaagggactgtgcccgtgaaacca
aagcactcgcagatgataacgctaaatacgactacagtgacggtgtggctggactcgtgg
ggtgatggcggctgcggcattctttacttcgtcatcgagtacagagagataagccaatct
cagtggcgcctagtctcaaacagcgtacaagcgacagaaagggtattcagcgtgacagga
ctgactccggccactcagtaccagttgagaataacagcgcacaacaatgcaggccacgct
gtcgccttgtacaattttaccacacattctttgtctggcatgttagatggtgaactttcc
cctccagtcccagctgctggttccagatctttaggcggcgcgcgtgtcattctaccagca
gcgttatctttactagttctcggtgctctgatagctattgtactattagtgagaagaaat
aaagccggtggcacagaaaccgttgccaccgagagtggggtcggcgagtcgccttctgtc
gcgcaactgcaaaacaaagtgaaccgcgaccaacaatacctggccgccagggcgcagcat
cccccgccgcaacatcattacaaacatgcatctaatgaatatatcgaagacatctgccct
tacgcgactttccaactgacaaaacccacagcgtatagcgaaagcagttatagtggcaac
gtatacagcggaccttatcactccgtgcgtggttcttttgtataccacgaccttaagcag
aatgataaatataagggcaaagagccagaatacacaaaagtacgaagaaaaggaaacaga
ctcagagatccacattcagaaagtcaagagtcggacaacttgggctcaacggactcggag
gtgaagaagatactaacgctgcacctgcccattacagagtacgaggacgacgccagcgac
gacgccagcgcgccgcattccgacagcgagccagccgcgagattgcggcccgcgcatcct
accacttacccatcagtggagcgtgaagaatcatcgtcttcatcggagaactctattgga
ggcgtcgtgcgtaaggccttcccatctcgaaagggcaaggccggcgcgcttggcaagaga
cacgtccgctcttcaagcgggtatagcagccacaacgatgaaaccacttttagtatatca
aactacccgtcattcaacgaacacatccatcctccatcgcgattctccgacgacacagaa
tgcgagggacatcaccggcgcaagcgcgggccgcatccccacccagacggcaaaatcact
agagaggcgttccagatcaatgtatga

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