Amyelois transitella (navel orangeworm): 106132684
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Entry
106132684 CDS
T09957
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106132684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atra03041
]
106132684
Spliceosome [BR:
atra03041
]
Common components
Common spliceosomal components
hnRNP proteins
106132684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_5
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
106132684
NCBI-ProteinID:
XP_060805539
LinkDB
All DBs
Position
19:join(6845762..6845851,6846608..6846664,6847599..6847642,6848090..6848165,6848309..6848419,6854835..6854963,6855389..6855602,6855826..6856004,6856477..6856646,6858820..6858865)
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AA seq
371 aa
AA seq
DB search
MKRDAYGDDGPSHKRQRHTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCP
GPERVLSILAPDVDSVLDIVKEILPNLADGGPKGNTEDLDVRLLIHQSRAGCVIGKGGSK
IKELRDKTGAKLKIFSNPAPQSSERVVQLVGNADAVAAGVREVLDLIRQVPIKGPIQNYD
PHNYDDFYADEYGGFGGGGGRGPPRGGPGRPSARPPPGPSRGPGGPRGPMSRGPPPGPTG
GPRGFGGNDFGGPPPRGNFGGGAPRGGFGGGFGGNFGGGGGGFSSNGGQETSTQVTIPKD
LAGAIIGKAGTRIRKIRAESGAGIEIAAPLQGSSDRIITITGTSARIQKAQYLLQQSVHE
SNPHLGRSSNF
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagacgcttacggagacgacggcccttcccacaagaggcagaggcatactgac
gatgaagtcacgtttctgattcccagcaaggtggctggttcgatcatcgggaagggcgga
accaatatatcaaagctcaggagccagtacaaagcctctataacagtcccagattgcccc
ggccccgaacgtgtactgtcgatattggctccggatgtcgattctgttttggatatcgtc
aaagagattcttccaaatttggctgatggaggacccaagggcaacactgaagacctcgac
gttcgcctattgatccaccagagccgagcgggctgcgtgatcggcaagggcggctccaag
atcaaggaacttcgcgataaaaccggcgcgaagctgaagatcttctcgaaccccgcgccg
cagagctcggagagggtggtgcagctcgtggggaacgccgacgcggtggcggccggagtg
cgcgaggtgctggacctcatcagacaggtaccaatcaaagggcccatccaaaactacgac
ccccacaactatgatgatttctacgcagacgagtatggcggcttcggaggaggcggcgga
aggggaccgccgcgcgggggccccggccggccctccgccaggcccccgcccgggcccagc
cgcgggcccggcgggccccggggaccgatgtcgaggggacccccaccaggacccactgga
ggtccccgaggcttcggcggcaatgatttcggcggtccgcctccgcgtggcaacttcggt
ggcggcgccccgcgcgggggcttcggcggcggcttcggggggaacttcggcggcggcggg
gggggcttctccagcaacggggggcaagagacctcgacgcaggtcactattcctaaggat
ctggccggcgcgataataggcaaggccggcacgcgcatccgcaagatccgcgcggagtcg
ggcgccggcatcgagatcgcggcgccgctgcagggctccagcgaccgcatcatcaccatc
accggcacctccgccaggatacagaaggcgcaatatctgctgcagcagagcgtgcacgag
agtaacccccatctcggtcgcagcagcaacttttga
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