Amyelois transitella (navel orangeworm): 106132686
Help
Entry
106132686 CDS
T09957
Name
(RefSeq) hepatocyte nuclear factor 4-gamma isoform X1
KO
K08704
hepatocyte nuclear factor 4
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atra03000
]
106132686
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
atra03310
]
106132686
Transcription factors [BR:
atra03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
106132686
Nuclear receptors [BR:
atra03310
]
2. Hepatocyte nuclear factor 4 like
2A. Hepatocyte nuclear factor 4 receptor
106132686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
106132686
NCBI-ProteinID:
XP_060805651
LinkDB
All DBs
Position
19:join(6686035..6686227,6688090..6688273,6688857..6688951,6693437..6693564,6694309..6694455,6695861..6695981,6696332..6696463,6697355..6697591,6698231..6698351,6700372..6700423)
Genome browser
AA seq
469 aa
AA seq
DB search
MPVCGYEKMSTQELCLMGYAGAPEYMMTPQPHVWDKPSEAAYPSYGHRNHQEISTDVNMT
YPTEDSDIQLETSSSEASAASSTALSQHCAICGDRATGKHYGASSCDGCKGFFRRSVRKN
HLYTCRFSRNCVVDKDKRNQCRYCRLRKCFKAGMKKEAVQNERDRINCRRPSYEEPTQAN
GLSVVSLLNAELLSRKVIDETINVSDAEINNRKLAKINDVCDSIKQQLLILVEWAKYIPA
FTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDVLLLGNNCIIAKHNIDGRMDIDISMI
GIRVMDEIVRPLREIDIDDTEFACLKAIVFFDPNAKGLSQPQKIKQLRYQIQINLEDYIS
DRQYDGRGRFGELLLCLPPLQSITWQMIEQIQFAKLFGVAHVDSLLQEMLLGGASAEGGM
EAEPAGAEPPLVPQLPSPAPFVDHAPFKQEPNMSPAHASPVRSADITML
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtgcggctacgaaaaaatgtctactcaggagttgtgtctaatggggtacgcg
ggggcgccggagtacatgatgaccccgcagccccacgtgtgggacaagccatcggaggcc
gcgtatccctcgtacggccacaggaaccaccaagagattagcactgacgtcaacatgact
taccccacagaagacagtgacatccaattggagacgagtagcagcgaggcgagtgccgcc
agttccacagctctctcccagcattgcgctatctgcggcgaccgggccacgggcaaacac
tatggagcgtcgtcctgtgatggctgcaagggattctttaggaggagcgtcaggaagaac
cacctttatacgtgcagattcagcagaaattgtgtggttgacaaggacaaaagaaatcag
tgtagatattgtaggctaaggaagtgttttaaggctggcatgaaaaaggaagccgtacag
aatgaaagagacaggataaactgcaggcgaccttcgtacgaagagccgacgcaagccaac
gggctctcggtcgtgtccctactgaatgctgagcttcttagcagaaaggtcatagacgag
acaatcaacgtaagcgacgcagaaatcaacaataggaagttggcgaagatcaacgacgtg
tgcgactccatcaagcagcagctcctcattctggtcgagtgggccaagtacatccccgcc
ttcacagagctccatctcgatgatcaggtggcgctactgcgcgcacatgccggcgaacac
ttgttgctgggctgcgcgcgccgctcgctgcatctgaaggatgtgctgttgctaggcaac
aactgcatcatcgccaaacataatattgatgggcgcatggacatagacataagcatgatc
ggaatccgcgtgatggatgaaatcgtgcgaccgctccgggagatcgacatcgacgacacc
gagttcgcgtgtcttaaggccatcgtcttctttgaccccaatgccaaaggtctctcccag
ccgcagaagatcaagcaactccgctaccaaatccagatcaacttggaagactacatcagc
gaccggcaatacgacggccgcggtcggttcggggaactacttctgtgcctgccgccactg
cagagcatcacgtggcagatgatagagcagatacagttcgcgaagctgttcggagtggcc
catgtggacagcttgctgcaggagatgttgctcggaggcgcgtcggcggagggcggcatg
gaggcggagccggcgggcgcggagccgccgctggtgccgcagctgcccagccccgcgccc
ttcgtggaccacgcgcccttcaagcaggagcccaacatgagtcccgcgcatgcttcgcca
gtaaggagtgccgacattactatgttatag
DBGET
integrated database retrieval system
