Amyelois transitella (navel orangeworm): 106132930
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Entry
106132930 CDS
T09957
Name
(RefSeq) U7 snRNA-associated Sm-like protein LSm11
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atra03019
]
106132930
Messenger RNA biogenesis [BR:
atra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
106132930
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF1318
Motif
Other DBs
NCBI-GeneID:
106132930
NCBI-ProteinID:
XP_013187956
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All DBs
Position
4:join(717734..718028,734815..734930,770816..770963,771703..771860)
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AA seq
238 aa
AA seq
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MSVDKESSSSSSESEIAPCSSKFDPVKALYADKVVLPVQDAPMFETINQYESAQSMDHIV
AVGQGDIVKKREKEKEEKRLEQQRIVEEKNRQRFAQYRDLAPVRKQKVARNVLTRIEAAT
GPLAALKECVDSRLRLKIITRNATGIRGELHATLVAFDKQWNLALCDVLEIWKKKAVKKR
KVPPCMGTPVPKGTAAKISAVPPIQETPLGGGVWECTRYLPQMLVRGEHVVLVNIVER
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagataaagaatcaagttcttcttcatcagaatcagaaatagctccgtgcagt
tcaaaatttgacccagtgaaagcgttgtacgcggataaagttgttttaccggtgcaagat
gcacccatgtttgaaactataaatcagtacgaaagtgctcagtccatggaccatattgtg
gcagtgggccagggtgatattgtcaagaagagagaaaaagagaaagaagaaaagcggctg
gagcaacagcgaattgtagaagagaaaaatcgccagcgatttgcgcaatatagagatcta
gcgccagttcggaaacagaaggtggcaaggaatgtattgacccgaatagaggctgctacc
ggccccctcgcagcgctgaaagagtgtgtggatagcaggctcaggttgaagataataaca
cggaacgcaacaggaataaggggtgagctacacgcaacactggtggccttcgacaagcag
tggaacctagccttatgcgacgtgctggagatctggaagaagaaagccgtgaagaagcgg
aaggtgccgccttgtatgggtacacccgtcccgaaaggtacagcggcgaagatatctgcc
gttcctccaatccaggagacacctttggggggtggggtgtgggaatgtacgaggtatctc
ccccaaatgctggtcaggggagaacacgtggtgctagtgaacatagtggagcgatga
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