Amyelois transitella (navel orangeworm): 106133029
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Entry
106133029 CDS
T09957
Name
(RefSeq) probable small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106133029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atra03041
]
106133029
03032 DNA replication proteins [BR:
atra03032
]
106133029
Spliceosome [BR:
atra03041
]
Complex A
U1 snRNP components
Sm proteins
106133029
U2 snRNP components
106133029
Complex B
U1 snRNP components
106133029
U4/U6.U5 tri-snRNP components
106133029
Complex C
U2 snRNP components
106133029
DNA replication proteins [BR:
atra03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
106133029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
106133029
NCBI-ProteinID:
XP_013188073
LinkDB
All DBs
Position
23:join(2535766..2535767,2535845..2536097,2538499..2538603)
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AA seq
119 aa
AA seq
DB search
MAATTKPRSEMTLEELAKIEEEEFSTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPRTGKGKKGKAVNKDKFISKMFLRGDSVILVLRNPLATAAGK
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggcggccactaccaagccacgctcagagatgactcttgaagagttagccaagatcgaa
gaagaagaatttagcaccggtcctttgtctgttctcacacagtccgtcaaaaataacacc
caagttttgatcaactgccgaaacaacaagaagttgttgggccgcgtcaaagcatttgac
cggcattgcaatatggtactggaaaatgtcaaggaaatgtggactgaagtgcctagaaca
ggcaaaggaaagaagggcaaagcagtgaacaaggacaaattcatttcaaaaatgttcctt
cgaggtgattccgtcatccttgtcctaaggaaccccttggctacagctgctggaaagtaa
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