KEGG   Amyelois transitella (navel orangeworm): 106133047
Entry
106133047         CDS       T09957                                 
Name
(RefSeq) coatomer subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:atra04131]
    106133047
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:atra04147]
    106133047
Membrane trafficking [BR:atra04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    106133047
Exosome [BR:atra04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   106133047
  Exosomal proteins of bladder cancer cells
   106133047
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz WDR55 Beta-prop_WDR36-Utp21_1st TPR_COPA_B Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_WDR41 Beta-prop_EIPR1 WD40_RFWD3 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_Aladin NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_RIG_2nd OB_DPOA2
Other DBs
NCBI-GeneID: 106133047
NCBI-ProteinID: XP_060806947
LinkDB
Position
23:join(2687492..2687719,2688084..2688200,2688791..2689027,2689483..2689620,2694598..2694761,2695354..2695491,2696147..2696233,2697007..2697190,2698072..2698224,2698865..2699085,2700117..2700254,2701134..2701237,2702256..2702422,2702917..2703114,2704052..2704233,2705253..2705388,2705838..2705946,2706368..2706500,2707265..2707440,2708196..2708411,2708997..2709220,2709960..2710199)
AA seq 1229 aa
MLTKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFH
IQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRQCISVLTGHNHYVMCAQFHPSEDLLVSASLDQSVRVWDFSGLRKKSVAPGPSGLA
EHLRNPQATDLFGQADAVVKHVLEGHDRGVNWAAFHPSLPLIVSAADDRQVKMWRMNDAK
AWEVDACRGHYNNVSCVLFHARHELILSNSEDKSIRVWDMTKRTCLHTFRRETERYWVLT
AHPTLNLFAAGHDAGMILFKLQRERPAYAVHNNLLFYIKDRQLRKLDMQTNRDSPVMQIK
GAGSRHQPYSMSLNHAEFCVLVSWRAGESWSYELYAAPREGEPAPEPARAPAASAVWVAR
NRFAALEKNNQLVIKNLKNEVSKKISTPSCEEIMYAGTGMLLLREPECVQLLDVQQKRTI
ASVKVSKCRYAVWNSDMTLVALLGKHTVTICTKKLEQLCSITEGARVKSGAFDDSSPQPV
FIYTTANHIKYCCRDGDYGIIRTLDVPVYAVKVIANETSARVVCLDRECRPKVLNIDPTE
YRFKLALVTRQYDQVLHMVRNAKLVGQSIIAYLQEKGYPEVALHFVKDPRTRLSLALQCG
NIEVALEAAKSLDEPNAWDKLAQAALTTGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKL
RKMMKIAEIRKDVSAQFQGALLLGDVRERIRLLKNAGQLSLAYLTAINHKQDEEAEQLKS
ALEAAGLAIPAASGATEVLRPPLPVQRAQTNWPLLAVSKSFFEVAGNARAAAETVGAVGA
VMGEEPLEAAGAWGDDEDPLAEDRDEGSAGAVDPEDACEDGGWDVGDDDLDLPEELAPVS
ANIDGDEAESQYFVAPTRGAAVAVSAKLRTAHDHVATGQFEIAFRLLNEQVGIVNFEPYL
DTFLAMYAAGRATFGALPSLPPLWAQLHRNWKEASGKDLLPVVTAKLNDLVTQLQQCYQL
TTAGKFTEAIEKLQRIVQIVPLLNVDSKTELTEAQQLLNICREYLLGLQMETARKAMPKN
TLEEQKRTCEMAAYFTHCKLQPVHQILTLRTALNMFYKLKNFRTAASFARRLLELGPRPE
VAQQARKILQACEKTPTDEHQLLYDEHNPFNICGISYKPIYRGKPEEKCSLCSASFMPEH
KGKLCTVCGVAEIGKDVLGLRICALQFQR
NT seq 3690 nt   +upstreamnt  +downstreamnt
atgttaactaagttcgagacaaagtcggcgagggtaaagggcatatcgtttcacgccaaa
aggccatgggtcctagcaagtttgcacaacggagtgatacaactatgggactaccgtatg
tgtacattgctggagaagtttgatgaacatgacggccccgtacgtggcatttgcttccac
atccagcaacccttatttgtgtctggaggcgatgactataaaatcaaggtttggaactac
aaacagaggcgttgcctgttcaccctgctcggccatttagattacatcagaactacattc
ttccatcacgagtatccatggattttgagtgcttcagatgatcagacaataagaatatgg
aactggcaatcccgtcaatgcatcagcgtgctcacaggccacaaccactacgtcatgtgc
gctcagttccacccttcagaagatctgctggtctccgcatcattggaccaatccgtgcga
gtgtgggacttctccggcttgagaaagaagagtgtggcgcctgggccgagcggtttggct
gaacatttgaggaatccgcaggctacagatttgtttggacaggctgatgcagtggtcaaa
cacgtattggaaggtcacgaccgaggggtcaactgggctgccttccatccctcattgccg
cttatagtgtctgccgcagacgacagacaggtcaagatgtggaggatgaatgatgccaag
gcatgggaagtagacgcgtgccgaggccattacaacaacgtatcgtgcgttctgttccac
gcgcgtcacgagttgatcttgtccaacagcgaggacaagtccatccgtgtctgggatatg
accaagaggacatgtctccacacgttccgccgggagactgagagatattgggttctaacg
gcccaccctacattgaacctgttcgcggccggtcacgacgccggcatgattctgttcaaa
ctacagcgcgagaggccggcttatgctgtacataataatttgctgttctacatcaaagac
agacaattacgcaagttggatatgcaaaccaatcgcgactccccggtgatgcagatcaaa
ggggcaggctccaggcatcagccgtacagcatgtcgctgaaccacgcggagttctgcgtg
ctggtgagctggcgcgcgggcgagagctggtcgtacgagctgtacgcggcgccgcgcgag
ggggagcccgcgccggagcccgcgcgcgcgcccgccgccagcgccgtgtgggtggcgcgc
aaccggttcgccgcgctcgagaagaacaaccagttggtgatcaaaaacctaaagaacgaa
gtgtcgaagaagatttccactccatcatgcgaggagatcatgtacgcgggcaccggcatg
ctgctgctgagggagccggagtgtgtgcagttgttagatgtccagcagaagaggactatt
gccagcgtgaaagtttcaaaatgccgttatgccgtgtggaactccgacatgacattggtg
gctttactcggcaagcatactgtcaccatctgtaccaagaagctggaacagctgtgcagc
atcaccgaaggagcaagggtcaaatctggagccttcgatgattcttcaccacaaccggtc
ttcatttacaccacggccaaccacatcaagtattgctgtagagatggcgactacggcatc
ataagaactctggacgttccggtgtacgcggtgaaagttatcgccaacgagacttcagcc
cgcgtcgtctgtctcgatcgggaatgtcggcctaaagtgcttaacattgatcccactgag
tacaggttcaaactggcgttggtgacgcgacaatacgaccaagtgctgcatatggtgagg
aacgccaagctggtgggacagagcatcatagcttatttgcaggagaaaggttacccagaa
gtggcgctccacttcgtgaaggacccgcgcacccggctgtccctggcgctgcagtgcggc
aacatcgaggtggccctggaggccgccaagagtctggacgaacccaacgcctgggacaaa
ctggcccaggccgcgttgaccactgggaaccaccagatcgtagaaatgtgctaccaacgt
acgaagaacttcgacaaactgtcgttcttgtatctcatcacgggcaatctggagaaactg
aggaagatgatgaagatcgccgagataaggaaggacgtgtccgctcagttccaaggcgcc
ctgttgctgggagacgtgcgggagagaattcggctgctgaagaatgctggacagctatcc
ctcgcctacctaacagcgataaaccacaagcaagacgaagaggctgaacagttgaaatcg
gctttagaagcggcggggctcgccatacccgccgccagcggcgccactgaggtgctgcgg
ccgccgctgccggtgcagagggctcagaccaactggcctttgttggcagtctccaagagt
ttcttcgaagtagcgggtaatgctcgtgcggctgctgagaccgtgggtgccgtgggcgcg
gtgatgggggaggagccgctggaggccgccggggcttggggggacgacgaggaccccttg
gctgaggacagggatgagggttccgcaggtgcggtggaccctgaagacgcgtgtgaagat
ggcggctgggatgttggagacgatgaccttgacttgcccgaggaactggctcccgtatct
gcgaacatagacggcgacgaagcggagtcgcagtacttcgtggcgccgacgcgcggcgcc
gccgtcgccgtgtccgccaagctgcgcacggcgcacgaccacgtggccacgggacagttc
gagatcgccttcagactgctaaacgagcaagtgggcatagtgaacttcgagccgtacctg
gacacgttcctggcgatgtacgcggcaggcagggccaccttcggagccctgccgtcgctg
ccgcctctctgggcacagctacacaggaattggaaggaggccagcggcaaggatttgttg
cctgttgtcaccgcaaaacttaacgatctggtgacccaactgcaacagtgttaccagctc
acgaccgccgggaaattcacggaagccatcgagaaattacagcgcatagttcaaattgta
ccacttttgaacgtggactctaagactgagctgacagaggcgcagcaactgctgaatatc
tgtagggagtatctgttgggattgcagatggaaactgctaggaaagcaatgcccaaaaac
acgctagaggaacagaaacgcacgtgtgaaatggctgcgtacttcacccactgcaagctg
cagccggtgcatcagatactcactttgagaacggccctgaacatgttctacaagctgaag
aacttcagaacggccgcttcgttcgccaggaggttgttggaactaggaccaagacctgag
gtggctcagcaggctaggaagattttacaggcttgcgaaaaaacacccacagacgagcac
caactgctatacgacgaacacaacccattcaacatctgcgggatcagctacaaaccgatc
taccgcgggaaacccgaggagaagtgttccctgtgtagcgccagctttatgcccgaacat
aaagggaagttgtgtaccgtatgcggtgttgccgagatcggaaaagatgtattagggctt
agaatttgtgctcttcagttccagagatag

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