Amyelois transitella (navel orangeworm): 106133155
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Entry
106133155 CDS
T09957
Name
(RefSeq) DEAD box protein 52 homolog
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atra03009
]
106133155
Enzymes [BR:
atra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106133155
Ribosome biogenesis [BR:
atra03009
]
Eukaryotic type
90S particles
Helicases
106133155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
FRG2
TniB
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-GeneID:
106133155
NCBI-ProteinID:
XP_013188240
LinkDB
All DBs
Position
13:complement(join(743665..743893,744522..744665,745296..745376,746477..746622,747177..747277,748293..748405,749040..749252,749635..749707,750294..750546,751076..751261,751920..752177,752258..752335))
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AA seq
624 aa
AA seq
DB search
MDAYDIFKKLTKGLTFKHRLLLAKDTEKDVKLLTVKKEEDVVVKKEELSEEEYENCDEVS
DVSKSSDEDSHSQSGGEDALQLVEGLTVGKKKKKNKKKEKTEDLQKKLELEEQNQFRNEH
GIKAIGRHVPPALRDFTELVSRYNVSQSLVDTATQCGYSEPTPVQRQAVPCMLEDRQILA
CAPTGSGKTAAFLLPILHSLGAPQGGPRALILCPTRELAHQIYREALRLSASTQLRCSVV
RNMKESKIREREATIRKSDIVISTPNRLCYLLNRDTVNISLNKVRWLIIDEADKMFEGST
DQVSDFRQQLDQVMTSCGGKQRRVAMFSATHTPAVAKWCRHNLRGLVNVTVGQRNAATNL
VEQELLFCGDESGKLLAFRQLVQKGLKPPVLVFVQSKDRAKQLFKELIYDGINVDVIHAD
RTQQQRDNVVRSFRVGRIWVLICTELMGRGIDFRGVNLVVNYDFPPSAIAYIHRVGRAGR
AGQRGKAITFFTQDDVGNLRSIASVMKQSGCSVPEYMLQMRQNPSKRKRLARKAPRRDKI
STLLEKPANRKLEDDKQSDATGKSTDSVKNGKHRKLRKIQNGGSNIKDSNNVKNNNKKEK
RDFKKRKQDKGKKNAFVSKKVKKL
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatacgatatatttaagaaactcacaaaaggtttaacttttaaacaccgtcta
ttgttagctaaagatacagagaaggatgtgaaacttctgacagttaaaaaggaagaagat
gtagtggttaaaaaggaggagttaagtgaagaagaatatgaaaattgtgatgaagtatca
gatgtttcaaaatcctctgatgaagattcacatagtcagagcggtggtgaagacgctcta
cagctcgtggaaggactaactgtaggaaagaagaaaaagaaaaacaagaaaaaagaaaaa
acggaagatttacagaagaaactggaacttgaagagcaaaaccagttccgtaacgagcat
ggcatcaaagccatcggtcgccacgtaccaccagcattaagagatttcacagagttggtg
agcaggtacaacgtgtctcagtccctggtggacacagcgacgcagtgcgggtactctgag
ccgacaccggtgcagaggcaggctgtgccgtgtatgcttgaggacagacaaattctagca
tgcgccccgacaggttctggcaagaccgctgcctttctcttgcccatcctccacagcctt
ggggctccacaaggcgggcctagggctctaatactgtgccccacgagagaactcgcgcat
cagatatacagagaagcgttaaggttgagtgcgtccacccaattgcgatgcagtgtggtc
cgtaatatgaaggagagtaagatcagagagagggaagctactattaggaaaagtgatatt
gttataagtactccgaatcgtctgtgctatctgttgaatcgtgataccgtcaacatttca
ctaaacaaagtccgatggcttatcatagacgaggcggacaagatgttcgaaggctccacg
gaccaagtgtcagacttcaggcagcaacttgaccaggtcatgacctcgtgtggcggcaag
caacgccgggtggctatgtttagtgctactcacacacccgccgtggctaagtggtgcagg
cataatcttcgaggacttgttaatgtcaccgttggacaaagaaacgcagcaacaaatctg
gtggaacaagagctactcttctgcggcgatgagagcgggaaacttctagccttcaggcag
ctcgttcagaagggactcaaaccgcctgtattagtattcgtccaaagcaaagatcgagcg
aagcagctattcaaggaactcatttatgatggcatcaacgtggacgtaatacacgccgac
cgcacccaacaacagcgcgacaacgtggtgcgcagcttccgagtgggcaggatctgggtg
ctgatctgcacggagctgatggggcgcgggatcgacttccgcggggtcaacctggtggtc
aactatgacttcccaccgtccgccatcgcttatatacacagagtgggtcgcgcggggcga
gcggggcagcggggcaaagccatcacgttctttacccaagatgacgtcggaaatctaagg
agcatagcatcggtgatgaagcagtccggctgttcagtgcccgagtacatgctgcaaatg
agacagaatcccagcaagaggaaacggctcgccaggaaggcgccgaggagggacaaaata
tcaacgttgctagagaaacctgccaatagaaaacttgaggatgacaaacagtcagacgcc
acaggaaaatccacagattccgtaaaaaatggaaaacatagaaagttgagaaaaattcaa
aatggcggctcgaatataaaagacagcaataatgtgaagaataataacaaaaaagagaag
cgagatttcaagaaaaggaaacaagataaagggaaaaagaatgcgtttgttagtaaaaaa
gttaaaaaattgtaa
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