KEGG   Amyelois transitella (navel orangeworm): 106133163
Entry
106133163         CDS       T09957                                 
Name
(RefSeq) structural maintenance of chromosomes protein 1A
  KO
K06636  structural maintenance of chromosome 1
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:atra03036]
    106133163
Chromosome and associated proteins [BR:atra03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    106133163
  Meiosis-specific proteins
   Cohesin complex and associated proteins
    106133163
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_21 AAA_29 AAA_23 AAA_13 DUF1664 CENP-F_leu_zip KxDL XhlA Baculo_PEP_C ABC_tran
Other DBs
NCBI-GeneID: 106133163
NCBI-ProteinID: XP_060803189
LinkDB
Position
13:complement(join(435104..435163,435727..435904,436541..436719,438119..438193,439369..439473,440423..440527,441402..441566,442465..442587,445166..445357,445633..445744,446702..446835,448018..448083,449101..449232,449926..450048,451291..451465,452349..452431,454010..454138,455474..455635,455838..455945,456699..456857,457669..457917,458937..459149,459676..459844,461357..461505,462661..462760,463410..463530,463609..463720))
AA seq 1225 aa
MPAFLKYIDMENFKSYRGHHRIGPLKSFTAVVGPNGSGKSNFMDAVSFVMGEKTSLLRVK
RLSDLIHGASINKPVSRSASVTATFVLEDMTEKQFQRSVIGQSSEHKIDGQSVSISSYLV
ELEKLGINVKAKNFLVFQGAVESIAMKNPKERTALFEEISGSGVLKEQYEACRAEVNRAD
EEAQFSYQKKKGVAAERKEAKFEKEEAEKYTRLKDELQDQKVELQLFHLYHNEKEIQNLE
EDLQHKQSELAKVEKKRQKADDALKEKKKEAGTVQRELAKIEQEIREVEAEISKKRPTFI
KAKERVTHSQKKLESAVKTLEQARKAHEAHQADIHKLEEELRLIEEQKAEWEASVGTGHT
GRADVHLEEAQIREYEELKMEASRQAARYLQELDSVNREQKADQDRLDNELRRKAEFENK
HRQKGHERNEAMKRVEKLNEHIKSSEQALEEQRRLRAELQADVGECRGRAAELQAQLEEV
ASQLGDARVDKHEEARRRKKQEIVESFKRDIPGVYDRMINMCQPTHKRYNVAITKVLGKY
MEAIVVDTEKTARRCIQVLKERMLEPETFLPLDYIQAKPLRERLRDIREPKNVKLLFDVL
RFEPAAIHRAVLFVTNNALVCETPEDASRVAYDLDRTKNSRYDALALDGTFYQKSGIISG
GSLDLARKAKRWDEKHLSQLKAKKEKLTEELRESMKKSRKESELTTVDSQIRGLESRLKY
AVSDRDTTLKQIKALDAELAELERKMDNFGPQIEEIERTIRARDSKIQEVKENMNNVEDV
VFRGFCRDIGVANIRQYEERELRAQQERAKRRMEFDAQIDRIASNLEFERSKDTQKNVTR
WERTVQDVEDELEAGRQAEAKQRQDIDRELRRADSLKADRAAGKARLDHAEEDANKARKE
VSTVQKDMQSIQKQISSIESKIESKRSERHNILRQCKIDDINIPLLEGSLEDASEESASA
PASASASLSSSALAARAARLLVDYSQLPSSLKDLDEPDEVKRKADKLQKAINTLQATVDK
IQAPNMRAMQKLNEVREKVNATNEAFVAARKRAHKAKLAFERVKKERHDKFIDCFDHVAN
EIDAIYKALAMNQSAQAFLGPENPEEPYLDGINYNCVAPGKRFQPMSNLSGGEKTVAALA
LLFAIHSYQPAPFFLLDEIDAALDNTNIGKVASYIRSKKGSLQTIVISLKEEFYGCADAL
IGICSEPADCLVSDVITLSLEKYDD
NT seq 3678 nt   +upstreamnt  +downstreamnt
atgcctgcttttctaaagtatattgacatggaaaacttcaagtcctatcgtggccatcac
cggatagggccgctgaagtctttcaccgctgtcgtcggccccaatggctcaggaaagtca
aatttcatggacgccgtaagttttgtaatgggagagaaaacttcattgctacgcgtgaaa
cgtctcagcgatttgattcacggagcttcgataaataaaccagtgtcccgcagtgcatca
gtgacagccacatttgttctggaggacatgacagagaagcagttccagagatcagtcatt
ggacagtcatcggaacacaaaatcgatggtcagtcggtgtcgatcagcagttacctagtg
gagctggagaagctcggcatcaacgtcaaggcgaagaacttcctcgtgttccagggcgcg
gtggagagcatcgcaatgaagaacccgaaggagaggaccgcgctgttcgaagagatcagt
ggatctggcgtcctgaaggagcagtacgaggcatgtcgcgcggaggtgaacagggccgat
gaggaggctcagttctcttaccagaagaagaagggcgtggccgctgaacgcaaggaggcc
aagtttgagaaggaggaggcggagaagtacacgaggcttaaagatgaactgcaagaccaa
aaggtggaactgcagctgttccacttgtaccacaacgagaaggagatccagaatttagaa
gaggacctgcaacacaagcagtcggagttggccaaggtggagaagaagcggcagaaggcg
gacgacgcgctgaaagagaagaagaaggaggcgggcacggtgcagcgggagctggccaag
atcgagcaggagatcagggaagtggaagcggagatctccaagaagcgtccaacgttcatc
aaggcaaaagaacgtgtgacccactcgcagaagaagctggaaagtgctgtgaagaccctg
gaacaagcccggaaagcccacgaggcccaccaggccgatatacacaagctggaggaggag
ttgaggctgattgaggaacagaaggccgagtgggaggcctcggtgggcaccggccacacc
ggacgagctgatgtacatcttgaagaggctcaaatccgggaatacgaggagctgaagatg
gaggcgtcccggcaggcggcgcgctacctgcaggagctggactccgtgaaccgcgagcag
aaggcggaccaggaccgcctggacaacgagctgcgccggaaggccgagttcgagaacaag
caccggcagaagggtcacgaaagaaatgaggctatgaagcgtgtggagaaactgaatgag
cacattaagagttccgagcaggcactcgaggagcagagaagactcagggctgaattacag
gcggacgtgggggaatgccgcgggcgagctgccgagctgcaggcgcagctggaggaagtg
gcctcccagctgggggacgcccgggtggacaagcacgaggaggcgcgccgccgcaagaag
caggagatcgtggagagcttcaagcgcgacatcccgggcgtgtacgaccgcatgatcaac
atgtgccagccgacgcacaagcgttacaacgtcgccatcaccaaggtcctggggaagtac
atggaggccatcgtggtggacacggagaagaccgcccgccggtgcattcaggtgctcaag
gaacggatgttggagccggagacctttctaccgctggactacatccaggcgaagccactc
agggaacgactcagagatatacgcgagccgaaaaacgtgaagctgctattcgacgtgctt
cgcttcgagccggcagccattcaccgtgcggttctgttcgtcaccaacaacgcgctggtc
tgcgagacgcccgaggacgcctccagggtggcctatgaccttgacagaacgaagaacagc
cgttatgatgctctggccctggacggcaccttctaccagaaatctggcatcatctcaggc
ggctccctggacttggcgcgcaaagccaagcggtgggatgagaagcatctgtcacagctc
aaggctaagaaggagaaactgacggaggagctgcgggagtcgatgaagaagtcccgcaag
gagtcggagctgacgacggtggactcgcagatccgcggcctggagtcgcgcctcaagtac
gccgtctccgaccgcgacaccacgctgaagcaaataaaggcattggacgctgagctggcg
gagttggagcgcaaaatggacaatttcgggcctcaaatagaagagatcgagcgtacgatc
cgcgccagggactccaagatccaggaggtgaaggagaacatgaacaacgtggaggacgtg
gtgttccgcggcttctgccgggacatcggcgtcgccaacatacgtcagtacgaggagcgt
gaactccgcgcgcaacaggagcgtgctaagcgtcgcatggagttcgacgctcagatcgac
cgcatcgcgtctaacctcgagtttgaacgctctaaggacacgcaaaagaacgtgacccgg
tgggagaggacggtgcaggacgtggaggacgagctggaggcgggccggcaggccgaggcc
aagcagcggcaggacatagaccgggagctgcgccgcgcggactcgctcaaggcggaccgc
gccgccggcaaggcgcgcctcgaccacgccgaggaggacgccaacaaggcgcgcaaggag
gtgtccaccgtccagaaagacatgcagtccattcagaaacagatctccagcatcgagtcc
aagatcgagagcaagcgcagcgagcggcacaacatcctcaggcagtgcaagatcgacgac
atcaacatcccgctgctggaaggcagcctggaggacgcgtcggaggagtccgcctccgcc
cccgcctccgcctccgcctcgctgtcctcctcggcgctggccgcgcgcgccgcccgcctc
ctcgtggactactcgcagctgccgtccagcctcaaggatctggacgagccggacgaggtg
aagcgtaaagcggacaagctgcagaaagccatcaacacgctgcaggccacggtggacaag
atacaggcgcccaacatgagggcgatgcagaagctgaatgaggtgcgagagaaggtgaac
gccaccaacgaggcgttcgtggcggcgcgcaagcgggcgcacaaggccaagctcgccttc
gagagggtgaagaaagagcgccacgacaagttcattgactgtttcgaccacgtcgccaac
gagatcgatgctatttacaaggcgttggccatgaaccagtctgcgcaggcgttcctcggc
ccggagaaccccgaggagccctacctggacggcatcaactacaactgcgtggcgcccggc
aagcgcttccagcccatgtccaacctctccgggggggagaagaccgtcgctgctttagcg
ttactcttcgccattcacagctaccaacccgccccgttcttcctgctggacgagatcgac
gcggcgctggacaacactaacatagggaaggtggcgtcctacatccgcagcaagaagggc
tcgctgcagaccatcgtcatctcgctgaaggaggagttctacggctgcgctgacgccctc
atcggcatctgttctgagcccgcggattgcctcgtgagtgacgtcatcaccctcagcctt
gagaagtacgacgactag

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