Amyelois transitella (navel orangeworm): 106133244
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Entry
106133244 CDS
T09957
Name
(RefSeq) serine/threonine-protein phosphatase alpha-2 isoform
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106133244
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atra01009
]
106133244
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atra03021
]
106133244
03019 Messenger RNA biogenesis [BR:
atra03019
]
106133244
03041 Spliceosome [BR:
atra03041
]
106133244
Enzymes [BR:
atra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
106133244
Protein phosphatases and associated proteins [BR:
atra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
106133244
Transcription machinery [BR:
atra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106133244
Messenger RNA biogenesis [BR:
atra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106133244
Spliceosome [BR:
atra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
106133244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
106133244
NCBI-ProteinID:
XP_013188351
LinkDB
All DBs
Position
22:join(1872495..1872555,1872706..1872837,1874079..1874295,1877868..1877956,1903456..1903652,1906246..1906393,1908913..1909051,1909906..1909909)
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AA seq
328 aa
AA seq
DB search
MADRDTDELNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAP
LKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENF
FLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSP
DLQAMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTAGWGENDRGVSFTFGTEVVGKFLSK
HEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGALMSVDETLMCSFQILKP
ADKRKLYSGLNMGRPNTPPRAQPKNKKN
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagagatacagatgagttaaacatcgataatgtaattaaaaaattactaaaa
gtacgaggcgagaagcctggtatgaatgtacagttgacagaaattgaaatcaaagggcta
tgcttgaaatcgcgggaaatattcctctcacaaccgatattacttgaattagaagccccg
ctgaagatatgcggtgacattcacggacagtactatgacttgttaagactgtttgaatac
ggaggtttcccaccagaatcaaactatctcttcctcggagactacgtggatcgtggtaaa
cagtccctggaaacaatctgcttattgctcgcgtacaagataaaataccccgagaatttc
ttcctattaagaggcaaccatgagtgcgctagcatcaataggatttatggtttctacgac
gagtgcaaaagaaggtataacatcaagttatggaaaacgttcacagactgcttcaactgc
ttaccggtagcggcgattgttgacgagaagatcttctgctgccacggcggcctctccccc
gacctgcaggccatggagcagatccggcggatcatgagaccgaccgacgtgccggaccag
ggtctgctgtgcgacctgctgtggtccgacccggacaaggacaccgccgggtggggggag
aacgaccgtggggtcagcttcacgtttggcacagaggtggtcggcaagttcctgtccaaa
cacgagttcgacctgatctgccgcgcccaccaggtggtggaggacgggtacgagttcttc
gccaagaggcagctcgtcacgctgttctcggcgcccaattactgcggcgagttcgacaac
gcaggcgcgctgatgtcggtggacgagacgctgatgtgctcgttccagatcctgaagccg
gccgacaagcgcaagctgtactcggggctcaacatgggccgccccaacacgccgccgcgg
gcgcagcccaagaacaagaagaactaa
DBGET
integrated database retrieval system
