KEGG   Amyelois transitella (navel orangeworm): 106133488
Entry
106133488         CDS       T09957                                 
Name
(RefSeq) nucleoporin Nup188
  KO
K14311  nuclear pore complex protein Nup188
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106133488
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atra03019]
    106133488
Messenger RNA biogenesis [BR:atra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     106133488
SSDB
Motif
Pfam: Nup188_N-subdom_III
Other DBs
NCBI-GeneID: 106133488
NCBI-ProteinID: XP_060806539
LinkDB
Position
3:complement(join(3525622..3526218,3526511..3526729,3527038..3527254,3527340..3527461,3527661..3529067,3529281..3529571,3529831..3530123,3530295..3530562,3530983..3531163,3531486..3531669,3531923..3532247,3532506..3532805,3532969..3533082,3533720..3533840,3534049..3534668,3534868..3535081,3535164..3535186))
AA seq 1831 aa
MTNNNSVRYWKRLWRWTTSESLTKEELMSILGAKDVTEALRQGLSSYKPNKPELYNQLQA
KNTDQTKLLAVVQILQHYMDVDCFQIWDIIKYYLCDISYGTPENALKNIAFVDTRHSVII
TSVTSPNIWNFYYAERLFLLKLLQYIIEFKDDNQNKHAKEFSKIFSDLDWNKTVDSLISQ
FEKLVTAAPPPRKIQHEFSSDTVRQEWAECNLREQITILQILLLIVNENAMSTEQFNKLM
VLFKKHGYGKSQGFSEFLEERHRDLCTRVMYMEVCLFMVVVDSKLIKNPSSWIESTKQNV
ECELTKLQMNIEHSAMLITWMLLSLQSEQHAKLFESQYQHYGSIALKMHVFEFLQQMLNS
SVLSDNSKCSLIIRKRIFNLLNILCDKFDADGTLSHQSGIMPLCADLIKTPELAAEFWEL
HSKEESFGVVSLWNTALEYFPYNYSALSTLASGLAEAGKSSVLNLLGELKNLPVYTEIYK
PNGVSLMSVHVDEAIIGREYYPLGDPSYRIEAGSRATIMERKEGTMIHFRTPYSYWTIFN
NEIEKALDRKQHHQHNITMTLQKVYEGTKVLKGVLKALVEDKEIPKSLVGPSEGVFDVLV
RFMRADAPALPLLVECLQVCTALIPAFPKEIHLRLSNTGLLPRIINQRLTHVEYTNGASF
DSAAVGSYLVTIEQPTGTYKFLGAYIDMLCAFHEASNDERITSDVILPGLVLILREVFPN
VCGWRYSHAADRRDMLRRCATFLTLVLQHTKDTNKSIELLKRTCLYSLLHSENALELLKI
ISVGNQQLERIMQDETNWVSGTCVQYLTTLQRCVAIVMFSLRLKNLVGEPNEMTPLEHLI
FAQNKQKDSLKVVPRVTSYINHAFNKSLPVLCCRLLKRFADSFQMSLFASLEMTPYQVRV
MFLDRLRDEYETADLKVAILEFVATCVGKQPGLTEAFFMINYEAAKEDKDKKEAQDKKDD
SFEGILGYMADYLGTVKSDVKLLHSPLLACIMGLFHALWKNNMQILVKKLRENPKFWEHM
TSPLFSEIQPNLRTYAQIFNVLGIELFACRGKPEPNLVEVLNQFFDTNKKHLDTWIDYIF
SFKGKDDDKEVADKVPVWLGLLTSWKDFTTIFCKCSPISLNIAHKAKMVAPCMTALLNEL
EDMKDSRLTVILAELYVIMLANWKDDCFDNRKGSAKQIETLLTNTAIMYECLHPRAIRAI
LSIGTVAISSLDYEIKANSVTAQNIIRSVTNINTIELEKLFDNIQDKKVETNGVKETIPP
VVLSLAMLEQCLDLYDDMFSELSQWFQSSRFVNKLLCCLQMNLQNRRHYHTCLAALRCLT
SYSRGPFSKDLLMSDIDQFLWMQLLPPKFDSNEALSWKPQEWWKIYAYSLDFISMMVMKH
GQFFASDAITFVGVHLDHLVEAILLPRQVYSIEALNLCSSTLNLVVQLVKFEARWRIQNI
NSLIGIMRSISACLYQCVILILRSRRSSDPALQTSDENIGQPPSVLHRTLEVLHMSTLCL
LAFSPDLLSLLADPGLDLERWQPLVELHFGAPKISYEPFPQLTFGTLLSAICLLTRTLNH
AYHVEEGGNSSLTCGSRSPRRRRACSCGSPEARRAARSDSLTSVSSAASALPPLDERLVA
GALEATATLLASQALLAVRDPSVASRHKQLIRRELGSELTPFHDFVRKRILCAAHNRSYL
VRNKIDAWPLQPNEEEVKRIEEVRKERNLIDEKDDRALPPPPPPKRASHDSMRQYILRKH
YLANCAQTPTKGPPSPVSHSTPASDKKKETSRSSKRVSWADTTPDSDESLDSSLEEIEPV
YSNLTDVQINNDEDYFHFMSVVFLYICQTEL
NT seq 5496 nt   +upstreamnt  +downstreamnt
atgactaacaacaacagtgtcagatactggaagcgattatggcggtggacgacatcggag
agtcttacaaaagaagagttaatgtctatacttggcgccaaagatgtaaccgaggcttta
cgtcaaggcttgtccagttacaaacccaacaagccagagctttacaaccagctacaagct
aaaaatacagaccaaactaagctgttggcagttgttcaaattttacaacattacatggat
gttgactgcttccaaatttgggacataataaaatactatttatgcgacatttcatatggg
accccagaaaatgctctgaaaaacattgcttttgttgacacccgccactctgtcatcatc
acatctgtcacatctcctaacatatggaacttttactatgctgaaagactgtttttactc
aaactcttgcaatatatcattgaattcaaggatgacaaccaaaataaacatgcaaaagaa
ttttcaaaaatattctcagatctggactggaataaaactgtggattccttgatatctcag
tttgaaaaattggtgacagcagcgccaccacctaggaaaatccagcacgaattttcaagt
gacactgtaaggcaggaatgggcagaatgtaaccttcgagagcagataactattttgcaa
atccttttattgatagttaatgagaatgccatgtctacggagcagtttaacaaacttatg
gtgttgttcaagaagcatggttatggaaaaagtcaagggttcagtgaattccttgaggag
agacacagggacttgtgtacgagagtgatgtacatggaagtctgcctgtttatggtagtt
gtagacagtaaacttattaaaaacccctcatcatggatagagtccaccaaacagaatgtg
gagtgtgagctcacaaaactgcagatgaatattgagcacagtgccatgctcataacttgg
atgcttctatcattgcagagtgaacaacatgccaagctgtttgagagccaatatcagcac
tatgggtcaatagcactcaaaatgcacgtatttgaatttctgcaacaaatgttaaattca
tctgtcctctctgacaattcaaaatgctcattgatcataaggaagcgaatattcaacctc
cttaatatattatgcgacaaattcgacgctgacggcactctcagccatcaatccggcatc
atgccactttgtgctgacctcattaagactccggaattagcagcagaattttgggaactc
cactcaaaagaagaaagtttcggagtagtgtccctgtggaacacggcattggagtatttc
ccctataattatagcgctttatcgacgttggcgtcggggctcgctgaagccggaaagagt
agcgttttaaatctactaggagaactaaagaatctgccagtgtacacagaaatctataag
cctaatggagtttcactgatgtctgtgcacgtagacgaggctatcattggccgggagtat
taccccttgggcgacccttcctacaggatagaagcgggttcccgggccaccatcatggag
agaaaggaaggaaccatgattcacttcaggacaccatactcttactggacgatattcaat
aatgaaatagaaaaagctttggatcgtaaacaacatcatcagcataatattactatgacg
ttacaaaaggtttatgagggcactaaagttttgaagggtgtcctaaaagccctagtagaa
gacaaagagattccaaaaagcctagtagggccaagtgagggcgtgtttgacgttctcgtg
cggttcatgagagcagacgcgcctgcgctgcctctgttggtggagtgcttgcaagtctgc
accgccctcataccggccttccctaaagagatacatttgagactaagcaacacaggcctc
ctgccgcgcatcataaaccagagactgacccacgtggagtacaccaacggcgcttcgttc
gactccgccgcagtggggtcttacctcgtcaccatcgaacaacccactggcacttacaag
ttcttaggcgcttatattgacatgctgtgcgcttttcatgaggcatccaacgacgaacgc
ataacatccgacgtgatcctgccgggcctagtgctgatcctgcgcgaggtgttccccaac
gtgtgcggctggcggtacagccacgcggccgatcgccgcgacatgttgcgccgttgcgcc
acattcttaaccctagtgctgcaacataccaaagacacgaacaaaagtatagagctgctg
aaacggacgtgtttgtacagcttgctgcattctgagaatgcgttggagttattgaagatt
atatctgtcggcaatcaacaattggaaagaataatgcaagacgaaacaaactgggtatca
ggtacctgcgtgcaatacttaacgacattacagagatgtgttgccatagtaatgttctca
cttcgcctcaaaaacctggtgggggagcccaatgagatgacccctctagagcatctcata
tttgcccagaacaaacagaaggactcgctgaaagttgtgcctagagtcacaagttatatt
aaccacgctttcaacaaaagtttaccggtgctgtgctgtcgccttttaaagagatttgct
gatagttttcaaatgtcactattcgcgtccctcgaaatgactccgtatcaagtgcgagtg
atgttcctcgaccgtctacgggacgagtacgagacggctgacctcaaagtcgccattttg
gagtttgtggcgacctgcgtgggcaaacagccggggcttactgaggcgttcttcatgatt
aactatgaggctgctaaggaggacaaagataaaaaagaggcgcaggacaagaaggatgac
agcttcgaaggcatcctcggttatatggccgattacttgggcactgttaagtcggatgtt
aaattgcttcacagcccattactggcttgcatcatgggcttgttccacgccctgtggaag
aacaacatgcagattttggtgaaaaaattacgtgaaaaccccaagttctgggaacacatg
accagccctctgttcagcgagatacagcctaacttgaggacgtatgcgcaaatattcaac
gtactaggaatcgaactatttgcatgcaggggaaaaccagaaccaaatctcgtagaagta
ttgaatcagttttttgacacaaacaaaaaacatcttgatacctggatcgattatatattt
tctttcaaaggaaaagatgacgataaggaagtagctgataaagtgccagtttggttggga
ctgttgacttcgtggaaagacttcacgacaatcttctgcaaatgttcaccgataagttta
aacattgcacacaaagctaagatggtcgcgccgtgcatgactgcacttttgaacgaattg
gaggatatgaaagacagcaggctcacggttatactggctgagctgtacgttataatgctg
gcgaattggaaagacgattgtttcgacaatcgaaaggggagtgctaaacagattgaaact
cttctcactaatacagctataatgtacgaatgtttgcatccacgcgccattcgcgccatc
ctgtctataggaacggtggctattagcagcttggattatgaaattaaagcgaacagtgtc
acagctcagaatattatacgatcagtgacgaatattaacactattgagctagagaagcta
tttgataacatccaggataagaaagtcgaaactaacggggtcaaagagaccatacctcca
gttgtattatcattagctatgttggagcaatgtttagatttgtacgacgatatgttttcg
gagttgagccaatggttccaatcgagcagattcgtcaacaaactgctgtgctgcctgcaa
atgaacctgcaaaataggcggcactaccacacgtgtttagctgctctaagatgcctcacg
tcatattcgagaggaccgttctctaaagatttactcatgagcgacatcgatcaattcctc
tggatgcagttactgccacccaagttcgactcaaatgaggcgctttcgtggaagcctcag
gaatggtggaagatatacgcgtacagtttagattttatatcgatgatggtgatgaaacat
ggtcagttcttcgcgagcgatgccataacatttgtgggcgtgcatttagaccatttggta
gaagccatactgttgccgcgacaggtgtatagcattgaagcgttgaatctctgctcttct
acgttgaatttggtcgtgcagctggtgaaattcgaagctagatggcgcatccagaatatc
aattctcttattggaatcatgcgcagtataagtgcttgtttgtaccaatgtgtgatattg
atcctgcgctcgcgtcgctcctctgaccctgctttacaaacgagcgacgaaaatattgga
cagccgccgtcagtattgcatagaacccttgaagtcttgcacatgtcgacgctatgcctg
ctcgccttcagtcccgatctgctgtctctgttagcggacccggggctcgatttagagcgt
tggcagccgttggtggaactccactttggcgcccccaagatatcctacgagccattccct
cagctcacatttggaacacttctgtcggctatatgtttattgacaagaactcttaatcac
gcgtaccacgtagaagaaggcggcaactcgtcgctgacgtgcggctcgcggtcgccgcgg
cgccggcgcgcgtgctcgtgcggcagccccgaggcgcggcgcgcggcgcgctccgactcg
ctcaccagcgtcagctccgccgcgtccgcgctgccgccgctcgacgagaggctcgtcgcc
ggcgcactggaggccacggccactttgctcgcctcgcaggccctgttagctgtgcgcgac
ccgagcgttgcgtctcgccacaagcagctcatccgtcgtgaactcggctccgaactcact
ccgttccacgatttcgtgcgcaagcgcatactttgcgccgcacacaaccggtcatactta
gtccgaaataaaatcgatgcgtggcctctacaacctaacgaagaagaagttaaaagaatc
gaagaggtccgaaaagaacgcaatttaattgatgaaaaggatgacagggcgctgccccca
ccacctccgccgaaacgagcgagccacgactccatgagacaatatattcttcggaaacat
tatcttgctaattgcgctcaaacgcctacaaaaggacctccttcgcccgtctcacactcc
acaccagcatctgataagaaaaaggaaacatctagaagttccaagcgtgtctcatgggct
gacactactccagatagtgacgagagtctggatagctcgctagaagaaatcgaacccgtg
tattcgaacttaactgacgtacaaattaataatgatgaagattatttccattttatgtct
gttgtatttctttatatttgtcaaactgagttataa

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