KEGG   Amyelois transitella (navel orangeworm): 106133589
Entry
106133589         CDS       T09957                                 
Name
(RefSeq) eukaryotic initiation factor 4A
  KO
K03257  translation initiation factor 4A
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atra03019]
    106133589
   03012 Translation factors [BR:atra03012]
    106133589
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:atra04147]
    106133589
Messenger RNA biogenesis [BR:atra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     106133589
   mRNA cycle factors
    Stress granule specific factors
     106133589
Translation factors [BR:atra03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    106133589
Exosome [BR:atra04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106133589
  Exosomal proteins of bladder cancer cells
   106133589
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 AAA_30 Helicase_RecD Flavi_DEAD CMS1 UvrD-helicase
Other DBs
NCBI-GeneID: 106133589
NCBI-ProteinID: XP_013188824
LinkDB
Position
2:complement(join(8898491..8898635,8898785..8899008,8899401..8899532,8900084..8900231,8900780..8900994,8901082..8901457,8901892..8901914))
AA seq 420 aa
MSYSPERRAEDWPEDSKNGPKDQGNYDGPPGMDPQGALDTNWHQVVESFDDMNLKEELLR
GIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALI
LAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMI
TRRALRANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRC
FMRDPVRILVQKEELTLEGIKQFFIAIEMEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD
WLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVIN
YDLPTNRENYIHRIGRGGRFGRKGIAINFVTEADKRALKDIEEFYHTTITEMPSDVANLI
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgtcttattcaccagaaagaagagccgaagattggccggaggattccaaaaatgggcct
aaagatcaaggaaattatgatggccctccaggtatggatccccaaggagcactcgataca
aattggcatcaagtcgtggaaagcttcgatgacatgaatttaaaagaagagttgctgaga
ggaatttacgcttatggtttcgaaaagccatcggctattcagcagcgtgctattatgccg
tgtatccaaggacgtgatgtcatagctcaagcccagtctggaactggcaagacagctact
ttctccatttctattttgcaacaaattgacactagcattcgcgaatgccaagcattgatt
ttggccccaaccagggagttggcccaacagattcaaaaagtggtgattgcacttggtgac
catttaaatgctaaatgccatgcttgtattggtggaactaatgtccgtgaagacattcgt
caactggaaagtggtgtgcatgtggtggttggtactccaggtcgtgtatacgacatgatt
actcgtcgtgcactccgtgctaatacaattaagctctttgtgcttgatgaagctgatgaa
atgttgtccagaggtttcaaagatcaaattcacgatgtattcaagatgctgtctgcagat
gttcaagtcatattgctctctgctactatgcccgatgatgtactggaagtttcacgttgc
ttcatgagggatcctgtccgcattcttgtgcagaaagaagagcttaccctggaaggtatt
aagcagttctttatcgccattgaaatggaagagtggaaacttgagaccctctgcgattta
tatgataccttgtcaattgcccaagctgtcattttttgcaacacccgccgcaaggtggac
tggctcactgagtcaatgcatgagcgtgatttcactgtgtctgctatgcacggtgacatg
gatcaacgtgagcgtgaagtgatcatgagacaattccgtactggatcttctcgcgtcctc
atcaccaccgacttgctagcgcgtggtattgacgtacagcaagtctcgtgcgtcatcaac
tatgatttgccaactaaccgcgagaattacattcatagaatcggaagaggcggtcgtttc
ggccgtaagggaatcgccatcaactttgttactgaagctgataaacgagcgttgaaagat
attgaggagttctaccatacaactattacggaaatgcccagcgatgtggctaacctcatc
tga

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