KEGG   Amyelois transitella (navel orangeworm): 106133647
Entry
106133647         CDS       T09957                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:atra04812]
    106133647
Cytoskeleton proteins [BR:atra04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     106133647
SSDB
Motif
Pfam: WD40_Prp19 WD40 Katanin_con80 WDR55 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_TEP1_C NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_WDR19_1st eIF2A Beta-prop_SPT8 Beta-prop_IP5PC_F Beta-prop_NWD2_C PEP5_VPS11_N WD40_RFWD3 Beta-prop_LRRK2 Beta-prop_WDR35_TULP_N Ge1_WD40 PROPPIN Beta-prop_VPS8 Beta-prop_WDR75_2nd RMC1_N
Other DBs
NCBI-GeneID: 106133647
NCBI-ProteinID: XP_013188904
LinkDB
Position
2:join(6808377..6808407,6808484..6808614,6808698..6809031,6809250..6809448,6809763..6809913,6810164..6810338,6810937..6811071,6811186..6811242,6811704..6811859,6812472..6812612,6813299..6813404,6813622..6813730,6814261..6814398,6814958..6815070,6815408..6815482,6815988..6816243)
AA seq 768 aa
MDSIRRSWKLQEFVAHKANVNCLAMGHKSNQVLATGGDDKKVNLWAIGRQSCLMSLSGHT
TPVECVCFGHSEDLVCAGSQTGALKIWDLEAAKLLRTFTGHKGAVKCMDFHPYGDYLTTG
SCDSNIKLWDTRKRGCIVTYSSHRLAVNSLQFSPDGQWIASACEDGLVKVWDVRVGKVLQ
EFMEHTAAVTSVKFHPHEFLLASCGTDRTVNFWDMEKFQLVSKFEKDNTSIRQMVFSDDG
TTLLGCGNDGLHVVGWEPIRTLDTVHGHWGQIHDITVAQTQLIAGSFHSTYVVLSVVDLN
KVYPFGGPPPVSQTVVRDLSPFQKGHSVRKSFSKEKPAKEVLHRSTLLDEKTAEESTSGT
EADEDSGAVISNINDYTEIFRPSRALMRTPPPATSLSSEDYSISSHESTVKLESGVGTSL
RELMLEAPPQRPRPDYSRIPTSTKDYAVEKKNEIFTRVMDSAKENNAFTSTQTTAVRDYV
SSALSTSTLNRHNSYKETKSPDLTNSTNLRQSNSEMALGPASLGPRSLSFTRIPNDSARR
RAESITQEPERDPEPEFVPFATDRAVGLDLEEFLPRGLALGGRRGRGGGGAQPSEQEVLG
VMMRGHDSMMAVLAARQRSLQIFHSVRINKSLKSALESVIALEDKSVILDILNVMAHKPS
LWNLDICLLMLPKIYDLLQSKYESYMQCGCNALRLIVRNFSSVVRANVSAPVRTLGVDIP
REERYAKCVQIHQLLLDVRAFLLKRQTLQGRLGAAFRDLHTLMQQGLD
NT seq 2307 nt   +upstreamnt  +downstreamnt
atggattcaataaggagatcatggaaactacaggaatttgtcgctcacaaggcgaatgtc
aattgcttggcaatgggacacaaatcaaaccaagtgttagcaactggaggtgatgacaaa
aaagttaatctttgggctatcggtagacaaagttgtttaatgagtttaagtggtcacaca
actcctgtggaatgtgtttgtttcggacattcggaagatttggtatgtgcaggctcacag
actggggctttaaaaatctgggacttagaagctgcaaagttgttaagaactttcactggg
cacaagggagctgttaaatgtatggactttcatccttacggtgattacttgacaactgga
tcttgtgacagcaatattaagctctgggatacaagaaagagaggttgtattgtgacatac
tcaagtcaccgacttgctgtcaatagcctccaattcagtcctgatgggcagtggatagca
tcagcttgtgaagatggacttgtaaaagtgtgggatgtgcgtgttggcaaagtactgcaa
gagttcatggagcatacggctgcagtcaccagtgtcaagtttcacccacacgagttcttg
ctagcaagctgtggcacagacaggactgtcaacttttgggatatggagaaattccaattg
gtttcaaagtttgaaaaagataacacatcgattcgacaaatggtatttagtgatgatgga
acaactcttcttggttgtggaaatgatggactccatgtggttggttgggaaccaatccga
acactcgacactgttcatggacactggggccaaattcatgatataactgtggcacagaca
caacttatcgcggggtcttttcattcaacttatgtggtgttatcagttgttgatttgaat
aaagtttatccatttggagggcctccacctgtgtcacaaactgttgttagagatctgtcg
ccttttcaaaaaggacactctgtaaggaagagcttttcaaaggaaaaaccagcaaaagaa
gtattgcatagatcgacgcttctagatgagaaaactgctgaagaatcaacttcagggact
gaagcagatgaggattcaggtgcagttatatccaatattaatgactacactgaaattttc
cgcccttctagagcattaatgcgcactccaccccctgctacgagtttatcatctgaggat
tattcaatttcaagtcacgagtcgaccgtaaagctggaaagcggcgtgggcacctcgctg
cgggaactgatgctggaggcgccgccgcagcgaccgcgcccagactactcccgcataccc
acctccactaaagactacgccgttgagaagaaaaacgaaatattcacaagggtgatggac
tcggctaaggaaaataacgcctttacgtcgacgcaaaccaccgcagttcgcgattacgtc
agcagcgcgctttcgacctccacgcttaaccgccataactcatataaagaaacgaaatcg
ccagatctaacaaattctacaaacctacgccaaagtaatagcgagatggcactaggtcct
gcatctttaggcccaagatctctatcatttacaagaataccgaatgatagtgcgagaaga
agggcagagagtataacacaagaaccggagcgggaccccgagccggagtttgttccattt
gcgacggacagagcggtgggattagatcttgaggaattcttaccacgcggcttggcgctg
ggcgggcggcgcgggcgcggcggcggcggcgcgcagcccagcgagcaggaggtgctgggc
gtcatgatgcgcggccacgactccatgatggccgtgctcgccgccaggcagcgctcgctg
cagatatttcattcagtgaggataaacaagtctctaaaatcagcgttagaatcagtaatt
gccttagaagacaaatctgtaatattggacatactcaatgtgatggcgcataaaccatcg
ctgtggaacttagacatttgtttgttgatgctgcctaaaatttacgatttactgcaaagc
aaatacgaatcatacatgcagtgtggatgtaatgccctaagactgatagtacgtaatttt
tcgtcggtggtgcgcgccaacgtgagtgcgccggtgcgcacgctcggcgtcgacattcct
cgcgaagaacgttacgcgaaatgtgttcaaatacaccaattgctgctagacgtgcgggcc
tttctgctcaaacgacaaaccctgcaaggacgccttggagctgccttccgtgacctccac
actcttatgcaacaaggacttgactga

DBGET integrated database retrieval system