Amyelois transitella (navel orangeworm): 106133651
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Entry
106133651 CDS
T09957
Name
(RefSeq) LOW QUALITY PROTEIN: TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atra04131
]
106133651
Membrane trafficking [BR:
atra04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
106133651
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Paralog
GFIT
Motif
Pfam:
TMF_DNA_bd
TMF_TATA_bd
Csm1_N
CCDC39
Motif
Other DBs
NCBI-GeneID:
106133651
NCBI-ProteinID:
XP_060802676
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All DBs
Position
11:complement(join(168017..168163,170354..170542,173137..173214,174396..174540,175144..175449,176248..176356,177131..177234,179357..179576,180460..180601,180999..181216,186948..188855))
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AA seq
1187 aa
AA seq
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MNWFDTSGLTSLAKTALKEAQKTIDKALDIQDESGEETENESSAQNVGKSSPGNSSAAEK
DNSDFFASWGLTVSAESSKDEPIKEQPVVTESPSKATSQSLWGSFAGSFFEQPKDNEPDT
AIVKPPKAKSMNLISDVKYGSQDDLFSKSQLVMSDGAEGLEKKIQCSKDDVGKDDRRSST
RSNRLSLMSSRNSSDSVEVLSQSMKTTPDSEAASGQSMSHSSSVGQKLNSDSVEVLPDSL
VSPSSIECLGFGSYSSDKNSSTSSNLSPGDVSDKKTTTIGEHTERPETADSVSLVADDDE
DTMSYNSVSECTAPTVLDTDDKPVSPFQKPIRAEPKKGIDKDFIHLEQSLSQKMQFSENS
SNDGSWSDRTLNADSDSITLETAEEQNKKSEEELLMERLSDSSSFYDVNVTAEMSRSDTS
AFVNIERNQCDAPGSSDSSQKECSVKERTSPISSDSKSDLVKIGSDRTSGHTSGDELETT
TSSDIEIIPSPNGDSHGYRSSPTKYAFKGKFDGTTSPNLVDLVLGKSLATKIRGHNRELS
EASVQSNTSDESQCSETDRLMRRLCEMAEILESRESRLMEVSRSNAELAENNADLKTQVE
SLLAKHEGGDISMITEDYTQRMSALEKKFQQAIREKDQLRKQLDSLKSESSSRKNSSEME
NALKEKDDVIAQLQEEGEKLAKQQLQHSNIIKKLRAKEKDNEQVIKSMRDKIAEQSAEMD
RLKRSMAAKEELEVNQIEAVYRLTTANKKLETELLETKSQLEDTTSRLETTRSSLEVARR
ELTELQRGATEVFRLRAANARLEEEAGAERQAAETLRHELQQLRAEMVNEQSRAAGREEA
LRRAADEAREQLALATRDSPQLMRDEGVATLLCQLAALQRAALDRDANYHNYVGAVADKL
NAADARIAKATENERVAREQNEQLRLHISSLQQRLRDGDALADRIRALAAAAGDGVFAGQ
VSSSRRWHISSLQQRLRDGDALADRIRALEQQLRETECSLASKTQELEEAKASWAAEEAA
LRQGAARLEAELREQGAALAAERNRAAILQEQLTRGEPSPPPSVASDSLSNSMWPLEDVP
GPAPAPAVCALSVEDTLSTLTRRDGELRAQAGTIAALLGERERLRALLAALQARLDLYQG
IQEQYDALLQMYGEKEEQLSELRLDLQDVTQLYKQQLDELIALRQHR
NT seq
3566 nt
NT seq
+upstream
nt +downstream
nt
atgaattggttcgatacttcgggtttgacaagtctcgcgaaaacggctctgaaagaagcc
cagaaaaccatcgataaagccctggatattcaagacgagagcggtgaagagacagagaat
gagtcctccgcccaaaacgtgggaaaatcttcaccaggtaacagtagtgctgccgaaaaa
gacaactcagatttctttgcttcatgggggttgacggtgagcgctgagagttctaaagat
gaaccaatcaaggaacagcctgtggtcaccgagagcccttctaaagcgacgtcccaaagc
ctttgggggtctttcgcgggctcgtttttcgaacagcctaaagacaatgaacctgatact
gccatagtaaaaccccctaaagctaaatctatgaatttaatttctgatgtcaaatacggc
agtcaagatgatttgttttctaaaagccagcttgttatgtctgatggggcagagggatta
gaaaagaaaatacagtgtagtaaagatgatgtcgggaaagatgataggcgttcatcaaca
aggtcaaacagactttctctaatgtcaagtaggaacagttctgattctgttgaggtgttg
tctcagagtatgaaaactactccggattcggaggctgcgtccgggcaatccatgtcccat
agcagcagtgttggccaaaaacttaattctgattcagtcgaagtgctgccagacagcctt
gtgagcccaagttctattgaatgccttggtttcggtagttactctagtgacaaaaacagt
agcacatcatctaatctttctccaggtgatgtaagtgacaagaaaacaactacaataggt
gaacatacggaaaggccagaaactgctgacagcgtgagcttggtggcagatgatgatgaa
gacactatgtcatacaactctgtatctgagtgcactgcacctacagtcttagatactgat
gacaaaccagttagtccatttcaaaaaccaataagagctgaaccaaaaaaaggaattgat
aaagatttcattcatttggagcagtctttgtcccagaagatgcaattcagtgagaattct
tctaatgatgggtcctggtcggacaggacattgaatgcagatagcgacagtattactcta
gagactgcagaagaacagaataagaaaagtgaagaagaactattgatggaaagactaagt
gattcctcatcattctacgatgtgaatgtgactgcagaaatgtctagatctgatacatca
gcctttgtgaatatcgagaggaaccagtgtgatgcgcctggcagcagtgactcttctcag
aaagaatgcagcgtgaaggagagaacatcgcccataagttctgacagtaaaagtgattta
gtcaaaattggttctgacagaacgtcggggcatacttctggtgacgagttagagacaaca
acttcgtctgatattgagataattcctagtccaaatggtgacagccatgggtacagaagc
agccccaccaagtatgcttttaaggggaagtttgatggaactacatctccaaatttagtt
gatttagtgttgggaaagtctctagctacgaagataaggggccacaatcgagagttatct
gaagcatctgtgcagagtaatacgagcgacgaaagccagtgttccgagactgatcgtttg
atgcggaggttgtgcgagatggcggagattttggaatcacgggagagcaggctgatggaa
gtgagtcggagcaatgcggagctggcggagaacaacgcggatttgaagacgcaggtggag
tctttgctggctaaacatgagggtggtgatatttctatgatcactgaagattatactcag
aggatgtctgctttggagaagaagttccaacaggctattagagaaaaggaccagctaagg
aaacagcttgactcattgaagtccgagtcttcgtcccgcaagaactcctcggaaatggag
aacgcgctgaaagagaaagatgacgtcatcgcccagctgcaagaggagggggagaagctg
gccaagcagcagctgcagcactccaacatcatcaagaagctgcgcgccaaggagaaggat
aacgagcaagtcatcaagagtatgagggacaagatagcagaacagtcagcggagatggac
cggctgaagcggtcgatggcagcgaaggaggagctggaagtgaaccagattgaagccgtg
taccgtctcaccacggccaataagaagttggagactgagctgttggagacaaaaagccaa
ctagaagacaccacgtcccgcctggaaactacacgtagttcccttgaagtggctcgccgg
gagctgaccgagcttcagcgcggcgccaccgaggtgttccggctgcgggccgccaacgcg
aggctggaggaggaagctggtgccgagaggcaggcggccgagaccctcaggcatgagctg
cagcagctgcgggccgagatggtcaatgagcagagccgcgcggccggccgcgaggaggcg
ctgcggcgcgcggcggacgaggcgcgcgagcagctggcgctggccacgcgcgactcgccg
cagctcatgcgcgacgagggcgtggcgacgctgctgtgccagctggcggcgctgcagcgc
gcggcgctggaccgcgacgccaactaccacaactacgtgggcgccgtcgccgacaagctc
aacgcagctgacgccaggatagccaaagccacggagaacgagcgcgtggctcgcgagcag
aacgagcagctgcgcctgcacatctccagcctgcagcagagactccgcgacggagacgct
ctggccgacaggatccgagcgctggagcagcagctgcgggagacggagtgttcgctggcc
aggtgagctccagcaggaggtggcacatctccagcctgcagcagagactccgcgacggag
acgctctggccgacaggatccgagcgctggagcagcagctgcgggagacggagtgttcgc
tggccagcaaaacccaggagctggaagaagccaaggcctcgtgggccgcggaggaggcgg
cgctgcggcagggcgcggcgcggctcgaggccgagctgcgggagcagggcgccgcgctgg
cggccgagaggaaccgcgccgccattctgcaggagcagctgacccgcggcgagccgtccc
cgccgccgtccgtggcgtccgactcgctgtccaactccatgtggccgctcgaggacgtgc
cgggccccgcgccggcgcccgccgtgtgcgcgctcagcgtggaggacactctgtccaccc
tcacgaggagggacggggagctgcgggcgcaggccggcaccatcgccgcgctgctgggcg
agcgggagcggctgcgggcgctgctggccgcgctgcaggccaggctggacctctaccagg
gcatccaagagcaatacgacgcgctgctgcagatgtacggcgagaaggaggagcagctgt
cggagctgcggctggacctgcaggacgtgacgcagctgtacaagcagcagctggacgagc
tcatcgcgctccgccagcacaggtag
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