KEGG   Amyelois transitella (navel orangeworm): 106133712
Entry
106133712         CDS       T09957                                 
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106133712
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atra03019]
    106133712
   03036 Chromosome and associated proteins [BR:atra03036]
    106133712
Messenger RNA biogenesis [BR:atra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     106133712
Chromosome and associated proteins [BR:atra03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    106133712
SSDB
Motif
Pfam: Nucleoporin2 Nup96 Nup98_GLEBS
Other DBs
NCBI-GeneID: 106133712
NCBI-ProteinID: XP_060808329
LinkDB
Position
28:join(995679..995721,996752..996880,998232..998438,999844..999984,1000998..1001131,1001767..1001896,1002581..1002667,1003535..1003630,1004061..1004152,1004743..1004899,1013265..1013402,1014580..1014702,1015426..1015531,1016146..1016240,1016894..1017033,1017600..1017745,1018389..1018498,1019224..1019257,1019509..1019600,1020078..1020242,1022418..1022525,1023335..1023454,1024387..1024537,1025636..1025738,1026221..1026332,1026943..1027146,1028166..1028234,1031600..1031698,1033954..1034097,1034705..1034794,1035689..1035817,1036535..1036650,1037369..1037530,1038905..1038983,1039846..1039974,1040872..1040994,1042068..1042245,1043144..1043309,1044065..1044186,1045058..1045186,1045734..1045815,1046576..1046644,1046938..1047040,1047529..1047650,1049981..1050090,1050728..1050875,1051937..1052035)
AA seq 1876 aa
MFQKPAFGSNSSGFGSFNAGSSTTTPFGGFKTNTGTSAFGAPPAFGASTSTQPATGGGLF
GATQPTTSLFGNTAASTSAPPFGASPSGFGFGGGSSTSTGLFAQPANNSGLFSSNQNTSA
FGAKPSTGFGFGGTSTSATTTGGLFGSTQNTNNSLFGQQQSTGLGTGLFSNTTGTFGQQA
ATGTGHVKYNPLVGTDVVVKGGTSQNVIIKHHCITCMKEYESKSLEELRLEDYTAGRKGS
AGGGMFGGFQQTENKPLFGGSTFGQPATTSAPNVFGGGGALNTSGGFGQTNTFSFGNNAQ
NTTNTTGLFGTAKPAFGAPATSGTGLFGAASTQASTFGTNTSTFGFGATTQNQTGGLFGA
KPATSGFGAPATSGFGGFGAASPAPTLFGAKPQQSAAPAFGTPTPAFGSLSGGFGTTTST
AGGLFGANNTFGKPAAQAPAFGFGTTQQPTLGTGLGSTGLGGAFGQKPATATGFGTLGGT
MFQQTNNNTFRTGLDSGLGGGLFNNSSLGGGTLGMGLNTNNSGTVLGNTSTGNVHEQILT
LAARPYGDSPLFKNLLPDRTTTAEDVLKPTNPAAVKAALESSGGYRVGSPNVNIKLSVRP
ATHHDKKSLFDGLEEADASLEDKLSLKPSRKRLVLRQTHRNEEHNSVEQINNNNRSMPEE
QPAQTEPAKSSETSLDELERVKRQVDFNEENSLKNNSERHGSWLTSPKTNNNSWSDNEKA
AEVGETPRLYPNLDKELPAQTAERRASWLTTKPLRKPVNWSPGCAENSVRELGVRDRSLG
KENIDTLSVSEEEHVPPVSMPPHPTGIKLTRPGYYTIPSLDDLTGYLRPDGSCVVPNFTI
GRKNYGNVYYDCEMDVAGLDLDALVHFLNKEVIVYPEDADKPPVGEALNRRAIVTLDRVW
PRDKTEKRPITDPERLLKMDYEGKLRRVCDKHDTKFIEYRPQTGSWVFRVEHFSKYGLTD
SDEEDDITPDVLKRQLVEQQQLQKSAAPAKPKPPAGLGGLGAPGLQGTVQSGLQPGLPLG
TLQSISSMPLSTSLLPEHMFAMQSSLGLYNGEGKGLTFEMDTTEDNAESHSMYSDSRALG
VKSPTSELARLEHRQSHHVQLMKASLYADAEMEDDVSVSTGDQQVPWTHSPPRVALQSAA
TVHTASDVTAPAILASNDEIAMKPLIVQPHTIVLKYHRKVPPFKKTIAGRLDAACIADMA
VCRARHSRIGFGPAGQFVFPTSLDSLADLPKSAELCDLGRYLGGRREDDWSEPIVARLAV
GHGDPSGYTQEALTLYMETLLEWSEVITSPVCPRLAVRTEPHARLQLLLKQREHARALRN
KSVQFGVTGEYCCEVWTLCEALWRADLENDGVAPEDVQSRVSQHKRLISWLTDAVKDVTE
GELASPSESEAEDDTDFHSGRVWTLLVGGRVLDACKLARKHGDLNMAALIAQAAGDPLFR
SLVSRQLTLWRECGAEPLISATRLATMRLVAGLSTPRDKLNTLDWMRALLATAKYICPQV
PTLEQVVRTYEGFFIGDDEDADLTTVEDDEMGMRHPVPPYCQDYELASNNGRHRRILDLR
YELIKARSRNARPGLKPASYTPDPLDYSLCFLLGTWFGNPTRESITGLADQLESLGAWHL
AVQALAYHPDDVARGHLIRGVLSRHAPAAADTEEQQKRMQLVRRLQIPEKWLLLAQAHRA
GYMHSWLVQARHLSDAEEWNAAHEVLLDKLLPDAVLGDNMKNVAPLLEKLYEAAQRHEVC
NWETGGLALYHYMHVCEQMQVVVSGTESGDVPGRLEALRPLVAAACRALQHLPHRSARHA
AARTEMGARLLQLAVAGGERAPRLAALLRALGLPPDCAQHAHRQITNELAEQASELCIDS
VSSSPISSQHRAAALS
NT seq 5631 nt   +upstreamnt  +downstreamnt
atgttccaaaagcctgctttcgggagcaacagctccggttttggttctttcaacgctggt
agttccacgactactccgttcggcgggttcaagactaacaccggtactagcgcgttcgga
gcgccgcccgctttcggcgctagtacctctacgcaacccgcaactgggggaggattgttc
ggcgctacccagcccacgacgagcctcttcgggaacacggccgcgtccacgtcagccccg
ccgttcggggcttcgccctcgggcttcggcttcggcggcggctcctccaccagcacgggg
ctgttcgcgcagcccgcgaacaacagcgggctgttctccagcaaccagaacacgtccgcc
tttggtgctaagccttccacaggtttcggcttcggcggcacttccacatcggccaccacc
acgggaggtctcttcggttccacacagaacaccaacaactctttgttcggacaacagcag
tccacggggctcggcaccggactcttctcgaacacaaccggtacattcggccagcaagcg
gccacgggcaccggccacgtgaaatacaaccccttagtcggcactgacgtcgtcgttaaa
ggcggaacttcgcagaatgtcatcatcaagcatcattgtatcacttgtatgaaggaatat
gagagcaagtctttagaggagctccgcctggaggattacacggcgggccgcaagggctcc
gccggcggcggcatgttcggcgggttccagcagacggagaacaagccgctgttcggaggc
agcactttcggccagccggccacgacgagcgctcccaacgtgttcggcggcggcggcgcc
cttaacacttccggcggatttggacagaccaacactttctctttcggcaacaacgcccag
aacacaacaaacacgacaggattgttcggcaccgctaaaccagcttttggagctccggcc
accagtggcactggtctgttcggcgcggcgtcgacacaggcttctactttcggaacgaac
acatctacgtttggattcggcgctaccacacagaatcagacgggcggcttgttcggcgca
aagccggccacatccggtttcggcgcgcccgccacttccggtttcgggggcttcggcgcc
gccagccccgcgcccacgctcttcggcgccaagccgcagcagagcgccgcgcccgccttc
ggcacccccacgcctgctttcggctcgctgtcgggcggtttcggcaccacgacgtcaacg
gccggcgggttgttcggcgcgaacaacacgttcggcaaaccggctgcgcaggcgccagcc
ttcggattcggcactacacagcaacccactctgggcacagggctggggtccaccggtctg
ggcggcgcgttcggccagaaaccggccacggccactgggttcggaaccctgggcggcacc
atgttccagcagaccaataacaacaccttcaggactggattggacagtggtctcggcggt
gggctgttcaacaattccagtctgggcggcggcaccctaggaatgggtctcaacacaaac
aactccggcaccgtgttaggaaacacttcaacgggcaacgtgcatgaacaaatactgacg
ctggcggcgcggccgtacggcgactcgccgcttttcaagaaccttctgcccgacaggaca
accacagcggaggacgttctcaaaccgaccaatccggcggctgtcaaggccgcgttggaa
tccagcggcgggtacagagtcggttcgccgaacgtcaacatcaaactgagcgtgcggccc
gctacgcaccatgataagaaatccctattcgacggcttggaagaggcggacgctagttta
gaagataaactgagtttgaagccgagccgcaagaggctggtgttgagacagacccatagg
aatgaagaacacaattctgttgaacagataaataataataacagatcaatgccagaagaa
cagcccgcacagacagagccggctaaatcttctgagacaagtctcgatgaactggagagg
gttaagagacaggtggacttcaacgaggaaaattctttgaagaacaattcggagagacac
ggcagttggttaacgtcgcccaaaacgaacaacaattcgtggtcggacaacgagaaagcg
gcggaagttggagaaacgccaagactctaccctaatttagacaaagaactccccgcccaa
acggccgaacgtcgcgccagctggttaaccacgaagccgcttcgcaaaccggtgaattgg
agcccagggtgcgccgagaactcggtgagagagctcggggtccgggaccgctccctcggc
aaggagaacatcgacactctgtccgtatcggaagaagaacacgttcctcccgtttcgatg
ccgccgcatcccacgggaatcaagctgactcggcccggatactacactataccgtccctg
gacgaccttacaggttacctacggccggacggcagctgcgttgttcccaatttcacaatc
ggaaggaaaaactacggcaacgtgtattatgactgcgagatggacgtcgcgggattggac
ttggacgctttggtgcacttcctgaacaaagaggtgatagtgtacccggaagacgccgac
aagccgccggtgggcgaggcactgaacagacgcgccatcgtcaccctggacagagtctgg
ccacgggacaagaccgagaagaggccgatcactgatccggagagacttctcaaaatggat
tacgagggcaaattgcgtagagtttgcgacaaacacgacacgaaattcatagagtaccgc
ccgcagaccggtagttgggtgttcagggtagaacacttcagcaagtacggcttgactgac
tcagatgaggaggacgacatcactcctgatgtgctgaagaggcagctggtggaacagcag
cagctgcagaagtccgcagctccagcgaaacctaaaccgccagctggtctaggcggcctc
ggagccccggggctccagggtaccgtacaaagcggccttcagccggggctacctctcggc
acactacagagtataagttccatgcctctgtctacctcactcctgcctgagcacatgttc
gcaatgcaaagctcgcttggcttgtacaatggagaaggaaaagggttgactttcgaaatg
gacacaactgaggataacgctgagtcgcacagtatgtactcagatagcagagctcttggc
gtgaagagtcccacaagcgaactggcccgtctcgaacaccggcagagtcaccacgtgcag
ctgatgaaggcttccctctacgctgacgctgaaatggaggacgacgtgtcagtatctacg
ggggaccagcaagtgccgtggactcattcgccgccccgggtcgcacttcaatcggcggcc
actgtacacaccgctagtgatgtcacggcgcccgccatcttggcgagcaatgatgaaata
gcaatgaaaccgctcatagttcagcctcacaccatcgtattgaaatatcatagaaaggtg
ccgcctttcaagaaaactattgcgggacgtctagacgcggcctgcatagctgacatggcg
gtgtgtcgcgcccgccacagccgcatcggtttcggtccagccggccagttcgtcttcccc
accagcctggattcgttggccgatttgcctaaatcggccgaactgtgcgaccttggcaga
tatctgggcggcagacgagaagacgattggagtgaacccattgtggcaagactggctgta
ggtcatggagacccgtctggatatacacaggaggccctgacactttacatggagacccta
ctggaatggtccgaggtgatcacgtcaccggtatgcccacgtctagcggtgaggacagaa
cctcacgcgaggttgcagctcctcttgaagcagcgggaacacgcgcgcgctctaaggaac
aagtctgttcagttcggcgtgaccggcgagtactgctgtgaagtgtggacgctgtgcgag
gcgctgtggagggccgatctcgagaacgacggagtggcccccgaagacgtacaatcgcgc
gtgagtcagcacaagaggctgatatcctggctgacggacgccgtcaaagatgtcaccgag
ggggagttggcgtcacccagcgaatccgaggctgaagacgacacggatttccacagcggt
cgtgtttggacgctcttggtgggcgggagggtgctagacgcttgcaagttggcgagaaag
cacggcgacttgaacatggcggcgctgatagcgcaggccgctggagaccctctattccgt
tccctcgtgtcccgccaactgactctgtggcgggagtgcggcgcggagccgctgatatct
gcgacgcgactggcgacgatgcgactagtcgcaggtctgagcacgccgcgcgacaaactg
aacacgctggattggatgagggcgttgctggccactgccaaatacatctgtccccaagtg
ccgacactggagcaagtggtgagaacctacgagggtttcttcatcggtgatgatgaagac
gctgaccttaccacggtggaggatgatgagatgggcatgaggcatcctgtgccgccctac
tgccaggattatgagctggcttccaataacggacgccaccgtcgcattttagacttgcgt
tacgagctgataaaggctcgctcgaggaatgcccggccgggactcaaacccgcttcctac
acgcccgatccgctggattatagtctgtgcttcctcctcgggacatggtttgggaaccct
acaagggagagtataacgggcttggccgaccagctcgagtcgttgggggcttggcatttg
gccgtacaagcactggcctaccatcctgatgacgtagctcgcggtcacctgattcgcggc
gtgctttctcggcacgcgcccgccgcggctgatactgaagaacaacagaagagaatgcag
ttggtaagaagattgcagataccggagaagtggttgttactggcgcaggcgcatagggcc
ggttatatgcattcgtggttagtacaagcacgccatctatcggacgctgaagagtggaac
gccgcgcatgaagtcttacttgataagctgttacccgatgccgtgttaggtgacaacatg
aagaatgtagcgcccctgctagaaaaactttacgaagccgcgcagagacacgaagtgtgc
aactgggagaccggggggctggccttgtatcactatatgcacgtctgtgagcagatgcaa
gtagtggtctcaggaacggaatccggcgacgtgcccggccgcttggaggcgttgcggcct
ctagtagcggccgcgtgtcgcgctctgcaacatttgccgcacaggtcggcacggcacgcc
gctgcccgcacggagatgggcgcgcggctgctgcagctggcggtggcgggcggcgagcgg
gcgccgcgcctcgccgcgctgctgcgggcgctcgggctgccgccggactgcgctcagcac
gcccatagacagataacgaacgagttagccgagcaagcttcagagttgtgcatagactct
gtgtccagttcacccatctcttcccaacaccgcgccgccgccttgagctag

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