Amyelois transitella (navel orangeworm): 106133773
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Entry
106133773 CDS
T09957
Name
(RefSeq) sodium channel protein Nach-like
KO
K03440
acid-sensing ion channel, other
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
atra04040
]
106133773
Ion channels [BR:
atra04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
106133773
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Gene cluster
GFIT
Motif
Pfam:
ASC
Motif
Other DBs
NCBI-GeneID:
106133773
NCBI-ProteinID:
XP_060809779
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All DBs
Position
Z:complement(join(7798908..7799158,7799544..7799650,7800158..7800293,7801542..7801595,7802407..7802518,7805267..7805431,7806939..7807062,7807698..7807855,7808131..7808296,7808692..7808801,7809124..7809220,7809465..7809652))
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AA seq
555 aa
AA seq
DB search
MIHFSSDGPIEVKQKKRLSDESNWNKKHEKIGRYPNKFVEFCKRTDLHGYKYIVMEELSS
FERGCWAFAVVVSIVVAVYFVVTAYMWYARNPIVTVIESTQGAIWDVPFPAITICDQNAI
SRKAARHFADTVTLPPNISADNIFEITRLAPLLYSGLGVTNKQKEDLRALQKVLDLNNFT
VDNFFRQLSPARSCGNIVQRCMWKNTIYRCDQLFKTVFTVVNLCCTFNYFAVKDSEKKEP
TEDPPKPRRVASCGYQTALTVLLNTDPNDYYSAVVGSQGFIVFVDDAYNVPDLDSPARLI
NPFTEVLIALSPERTYATNGIKYFSPEQRQCYYNNEVKFGSFRQYSFHNCMAYQRMELVR
RACDCVPFYFPHKEPVRLCNFNDVPCLENIYMPKEDHHDNFGMTFHCFPECEHFDYPLEV
AQGDLAHDLQHNGLPFFNDVKLENRSLLNVFFNDLVSTKYRRDVYFNWQNLLAAFGGLLS
LMLGFTLISGFDFVLFFAFRMPFDKFFRKATPESSVNAMKNKVNPSKLSVQQKKDTWMSD
SLKNEVFLSRYNKKW
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgattcactttagttcagatggacctatagaagtaaagcagaaaaagaggctctcggac
gaaagtaattggaataagaaacatgagaagattggccgttatccgaacaagttcgtcgag
ttctgtaaaaggacggatttgcacggatataagtatattgttatggaggagctcagctct
tttgaaaggggatgctgggctttcgcagtggttgtcagtattgtagtcgcagtttatttt
gtagtgactgcatacatgtggtatgcccggaatccaatcgtcaccgtcatagaaagtaca
caaggcgccatttgggacgtgcccttcccggctattaccatttgtgaccaaaatgctatc
tcgcggaaagccgcaaggcattttgccgacactgtgacacttccgccgaatattagcgct
gacaacattttcgaaatcacccggcttgctccactgctgtactcaggtctcggggtcacc
aataaacagaaggaggatttgcgggctttacaaaaagtgttggacttgaataactttact
gttgacaacttttttcgacagctttctccggcgcgctcctgcgggaacatagtccagcga
tgtatgtggaaaaacactatataccgttgtgatcagctgtttaagactgttttcaccgtc
gtcaatctgtgttgcactttcaactactttgccgtcaaagattcagaaaaaaaggaacct
acagaagatcctccgaaacctcgccgggtagcgtcttgtggctaccagactgcgcttacg
gttctcttgaacaccgatccaaacgactattacagcgcagtcgtcggatcccagggtttt
attgtgtttgtggatgacgcatacaacgttcccgacctggactcgcctgcgcggctcatt
aaccctttcactgaggtgctcatagctctgtcaccagagaggacgtacgcgaccaatggg
atcaaatattttagtcctgaacagaggcagtgctattataataacgaggttaaatttggt
tctttccgtcaatattcgtttcataactgcatggcataccaaaggatggaactagtgagg
agagcttgtgattgtgtccctttttactttccacataaggagcctgtacgtctttgtaat
ttcaatgatgtaccatgcttggaaaatatatatatgccaaaggaagatcatcacgacaac
tttgggatgacattccactgcttccccgaatgtgaacacttcgactatccattggaagtg
gcccagggagacctggcccatgatctacaacacaatggtctaccttttttcaatgatgta
aaactggagaatcgctctctgctcaacgtattttttaatgacttagtatcaacaaaatac
cgccgggatgtttatttcaactggcaaaatttattggctgcctttggaggactcctcagt
ctgatgctcgggttcacattgatttctgggtttgatttcgtgctattctttgcattcaga
atgccatttgataaattctttcgcaaagcaaccccagaatcatccgtcaacgcgatgaag
aataaagtgaaccccagtaaattgtcagtacaacagaaaaaggatacgtggatgtcggac
tctcttaaaaatgaagttttcttaagcaggtataataagaaatggtaa
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