Amyelois transitella (navel orangeworm): 106133829
Help
Entry
106133829 CDS
T09957
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 4
KO
K19613
leucine-rich repeat protein SHOC2
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
106133829
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRR_NXF2
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
106133829
NCBI-ProteinID:
XP_013189117
LinkDB
All DBs
Position
Z:join(7439690..7440021,7453876..7454044,7454466..7454672,7454755..7454943,7455219..7455449,7455528..7455749,7456029..7456227,7456796..7457247)
Genome browser
AA seq
666 aa
AA seq
DB search
MVAHMHALAAALLCALAGQLGAGASLHCAMRREISPCTCRREETGTGAILVVCQKITAYE
EIARALTNKFTPETKIGLDISYSKLPDFEDHSFRELGLSITRLKLNFDNLSDLKESVFTK
LDLVDYFSLADNSLLEMPRHVLRHLPHVKTLDMCRNKITKLTVEDFKDIQEVEHLLVADN
QIAKIERDAVPKALRHVHFGINKLSTLNGALRDLDDLEWIFINANNLKSIDNELPVKAKK
ITLIHAAHNELQNLPQDLKQMPSLESLYFYDNNIKSLDRSLQKSRRLMRVSLSFNKIESL
AEDEFAETEKLLDLDIAYNHLKHLNGSLRNLKSLRYLNLTHNLLTEFSLQEIKGLKRLSV
IDLSHNKINHITGKMENLVHVETCVLELRLDHNHLMNLGGALMGLHGLLRLNLSNNQIQQ
ISPDDLIGLEDLKVLDISYNHITSLEETSKTFLPALEELIAHHNNITILDKDFHGLPALC
LADLSYNYIQTMNYDLVTKSRCTINGVPSILKIYLQDNPVLCSEGLFDLVKELENLNARI
SGQSTCVATQTNAPVLNMRALNDIVPQQEQPLIVVAHVGAGLQGLAQDTMERELVPPESQ
LMYRRVGAIIGHLLPEDGLPVLVDPPVTLPPESTNVVVKWPDEKTDEQSHPLADHLRLRD
LNASPQ
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggttgcgcatatgcacgcgctcgccgccgcgctcttgtgtgcattggccggtcagctg
ggagctggtgctagtctccattgtgccatgcgcagagaaatttcaccgtgcacctgcagg
agagaggaaacagggacaggtgccatcttagtagtttgccaaaaaatcaccgcctatgaa
gaaatcgcacgagctctcaccaacaagtttactcccgaaactaaaattggcctggatatc
tcctactcgaaactaccggacttcgaagatcatagctttcgtgaactcggcctatctatc
acaagactaaaacttaatttcgacaacctaagcgatctgaaagaaagtgtgtttacgaaa
ctggatctggtggactactttagtttggctgacaattcactgttagaaatgcctcgacat
gttctgcgccatcttccacatgtcaagaccctcgacatgtgtcgaaataaaattactaaa
ctcacagtggaggactttaaggacatacaagaggtggagcatttactagtagctgataat
caaatagcaaaaattgaaagagacgctgtacctaaagctttacgacatgttcattttggt
attaacaagttaagtacgttaaatggagctctacgagacttagatgatttggagtggata
tttataaatgctaataatttaaaatcaattgataatgaactaccagtcaaagccaaaaag
ataacacttattcatgcagctcacaatgagctacagaatttgcctcaagatttgaaacaa
atgccatcgttggagtcactctatttctatgacaataatatcaaatcgttagacagatcc
ctgcaaaaatcgaggagactgatgagagttagcctctcattcaacaaaattgaaagtctc
gctgaggatgaattcgctgaaacagaaaaattgttggatttagacatagcttacaaccac
ctaaaacatctgaatggctcattaagaaatctaaaatctctgagatatttaaatctcacg
cataatttattgaccgaattttcattgcaagaaattaaagggctgaagaggttatcagtt
attgatctctcacataataaaataaatcacatcacaggaaaaatggagaatcttgttcat
gtggagacatgtgtgttagaattacgtttagaccacaatcacctgatgaatttaggggga
gctctcatggggctccatggactattgagactaaacttgagcaacaatcaaattcaacaa
atatcgcctgatgacttgatcggtttagaagatttgaaagttctggatatttcatacaat
catatcacatcattagaggaaacttcaaagacatttttgcccgcattagaggaactgatt
gctcatcacaacaatatcacaattttggacaaagacttccatggtttgcccgcactgtgt
ctcgcagacctgtcctacaactacattcagacaatgaattatgatctggtgacaaaatca
cggtgtactataaatggagttcctagtatcttaaaaatttatcttcaagataatcctgtg
ctgtgcagcgaaggattgtttgacttggtgaaggagctagaaaatttgaacgctcggata
agtggacagtcaacttgcgtggctacgcaaacgaatgcgccagtactgaacatgagagcg
ttgaacgatatcgtgccgcagcaggagcagccattaatagtggtcgcgcacgtgggggct
ggcttgcagggccttgcgcaggacaccatggagcgcgagctggtgccgccagagtcgcag
ctcatgtacaggcgtgttggagccatcatcggccatcttctacccgaggacggactccct
gtcctcgtggacccgcccgtcacgttgccaccagaaagcactaatgtcgtggtcaaatgg
cctgatgaaaaaactgacgaacaatctcaccctctggcggaccacctgcgtttaagagat
ttaaacgcatctccacagtga
DBGET
integrated database retrieval system
