KEGG   Amyelois transitella (navel orangeworm): 106133844
Entry
106133844         CDS       T09957                                 
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
  KO
K04984  transient receptor potential cation channel subfamily A member 1
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:atra04040]
    106133844
Ion channels [BR:atra04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   106133844
SSDB
Motif
Pfam: Ank_2 Ank Ank_4 Ank_3 Ank_5 Ion_trans
Other DBs
NCBI-GeneID: 106133844
NCBI-ProteinID: XP_060809510
LinkDB
Position
Z:complement(join(11346042..11346179,11346370..11346500,11347114..11347273,11347658..11347930,11348741..11348929,11349687..11349892,11350977..11351274,11351986..11352093,11352863..11353007,11353382..11353551,11355567..11355846,11356671..11356849,11357219..11357326,11357729..11357968,11358875..11359171,11360553..11360678,11362011..11362080,11362750..11362840,11363348..11363504,11370255..11370410,11375915..11376067))
AA seq 1224 aa
MPRMWFIGAAAERQPPRSGGPAVVASAGCGVPPVPIFSHDSHSVPRKRGLAEWMWTLTGH
NREPRPKLDHGGELQIMLPSKDQDKLNSGEVCLLAESPYRILRAAESGNVEDFMRLYLSE
PSRLAVRDGRGRTAAHQAAARNNTNILHFINNYGGDLNVKDNNGNTPLHVAVENEAIDAI
EFLLQQNVDTGLLNEKTQAPIHLATELNKVSVLQVFAKYKTQFNVDLGGEHGRTALHFAA
IHDHDLCARVLITDLGAECKRPCNNGYYPIHEAAKNASSRTMEVFLQWGEAKGCTREQMI
SLYDNEGNVPLHSAVHGGDIKAVELCLRSGAKISTQQHDLSTPVHLACAQGALEIVKLMF
TMQPKEKLACLTSCDVQKMTPIHCAAMFDHPDIVNYLISEGSDINPLDKERRSPLLLAAS
RAGWRTVHTLIRLGADIQLKDINSRNVLHLVVMNGGRLEDFAANCKDRCEKSLAQLLNEK
DNTGCSPLHYASREGHIRSLENLIRLGACINLKNNNNESPLHFAARYGRYHTACQLLDSD
KGTFIINESDGEGLTPLHISSREGHTRVVQLLLNRGALLHRDHNGRNPLHLAAMSGYTQT
IELLHSVHSHLLDQVDKDGNTPLHLATMENKPNSIALLLSMGCRLIYNNLDMSAIDYAIY
YKFPEAALAMVTHEQRAKEVMSLRSDRHPCVTLALIAYMPRVFEAVQDKCITKANCKKDS
KSFYIKYSFKFYQHSKLEIDALRLALNDPKYRPEPLSVINAMVAHGRVELLAHPLSQKYL
QMKWNSYGKYFHLANLLFYCIYLTFVTVYTYLLMLNADPSTSSVQRREDQICKANNGTNA
SALTTQSTNCGNRNVEFNGDFETLVAMYTSTVAILVYNAICLGREAYNVKQQKWHYLVDP
SNFVSWPLYLCSSLMVFPTVLGNYSDIQFSAASVTVFLSWFELLLLLQRFDQVGIYVVMF
LEILQTLIKVLMVFSILIIAFGLAFFILLSKGQHVSFNSIPMSLMRTFAMMLGEIDFVGT
YVQPYYKPEMDIILPFPMPTFLILGVFMVLMPILLMNLLIGLAVGDIESVRRNAQLKRLA
MQVVLHTELERQLPAILLERVDKDELIEYPNTNKCKLGFLDLILRKWFCNPFTDDAGLDL
VLESNEDFITAELDKQKRRLREMSQLLEQQHTLVRLIVQKMEIKTEAGDVDEGVSPSETR
VVPRWSSPRIRKKLRTAPSFNKGG
NT seq 3675 nt   +upstreamnt  +downstreamnt
atgccgaggatgtggttcatcggcgcggcggccgaaaggcagccaccaaggagtgggggg
cctgcggtagtcgcttcagctggatgcggagtaccccccgtaccaatcttctcacacgat
tcccattcagtgcctagaaaaagaggacttgcagaatggatgtggactttaactggacat
aaccgtgaaccaagacccaaactcgaccatggcggagaactccaaataatgctgccgagt
aaagatcaagataagttaaattctggtgaagtgtgccttttagctgaaagcccttatcga
atactgagggcggcagaaagcggcaatgttgaagactttatgcgcttgtatctgagtgag
ccttctcggctggcggtccgggacggtcgcgggcggacagcggcgcaccaagccgctgcg
agaaacaacaccaacatattacacttcatcaacaactacggtggagatcttaatgtcaaa
gacaacaatggtaacacacccctgcatgtagctgttgagaacgaagctatagacgctatt
gaatttttattacaacaaaacgttgatacgggactattgaacgaaaagactcaggcacct
attcatttggctacagaactaaataaggtatctgtgttgcaagttttcgcaaagtacaaa
acccaattcaacgtggatttaggcggcgaacacgggcgtaccgctcttcattttgctgca
atacacgaccacgacctgtgcgcaagagtattgatcaccgacttgggcgcggaatgcaaa
cggccttgcaacaacggctattatccaatccacgaggccgcaaaaaacgcatcgtcaaga
actatggaggttttcctccaatggggagaggcgaagggttgtacgagagaacagatgata
tcactttatgacaacgaaggcaatgtgccactgcattctgcagttcatggaggggatatc
aaggcggtagaactatgcctgaggtccggtgctaagatttctacacaacaacatgatctg
tcgacccccgtgcatttagcttgtgcccagggagccttggaaattgtcaagttaatgttt
acgatgcaacctaaagagaaattggcttgcctcacttcgtgcgacgtgcagaaaatgact
ccgatacactgcgccgctatgttcgaccatcccgacatagtgaactatctcatttctgaa
ggttcagatatcaatccgctagacaaggaaagaagatcgccccttctgcttgctgcttct
agagcgggatggaggacggtccatactttgatacggcttggtgcagatattcagctaaaa
gacatcaactctagaaatgttcttcatctagtagttatgaatggtggtcgcttggaagac
tttgctgctaactgcaaggatcgatgtgaaaaaagtttggctcagcttctaaacgagaaa
gataacactggctgttcaccgctgcactacgccagcagagagggtcacatcagatctttg
gagaatttaattcgactcggggcttgcattaatttaaaaaataacaataatgagagtcca
ttgcacttcgctgccagatacggtcgttatcacacggcttgtcaactattggattctgac
aagggcacgtttatcataaacgagagcgatggagaaggactcactcccctgcatatttct
tcaagagaaggtcacacaagagtagtacaattgctgctgaaccgaggcgccttgttgcat
agagatcataatgggaggaatcccctacacttggccgctatgagtggttacacgcaaact
attgagttgctgcattcagtccactcgcatttacttgatcaggtcgataaagatgggaat
actcctctacacctcgccacgatggagaacaagccaaactctatagctctcctcttgtct
atgggttgccgactcatttataataatctggacatgagcgctatagactacgctatctac
tacaagttccccgaggcagcgttggcgatggtcactcatgaacaaagagcgaaggaagta
atgtcgttgcgttcagaccgccatccgtgtgtgaccctcgccctcatcgcctacatgccg
cgagtgttcgaagctgttcaggacaaatgtataactaaagccaactgcaagaaggattcc
aaaagtttttatataaagtattctttcaaattctaccaacactccaagcttgagatagac
gcattgcgactggcgctgaacgaccccaaataccggccagaaccgttgagtgtgatcaac
gccatggtggcacacggtcgtgtagaattgctggctcatccactgagccaaaaatatctt
caaatgaaatggaattcttacggcaaatattttcatttggcaaatttgcttttttactgt
atatatctgacttttgttaccgtttatacgtatctgttgatgttgaatgctgatccgagc
acatcgtccgttcaaagaagagaagatcagatatgtaaggccaacaacggaacgaacgca
agcgcactcactacgcaaagcactaattgtggaaacagaaacgttgaattcaatggtgat
ttcgagaccttagtagcaatgtacacgagcacagtagctattctggtgtataacgcaatc
tgtcttggtcgtgaggcgtataatgtgaaacagcagaaatggcattacctggttgacccc
tcgaacttcgtttcctggccgctttacctttgctcctcgcttatggtgtttccgactgtt
cttggcaactattctgatattcagttttccgccgcttcggtgacagtgtttttatcttgg
tttgaactgttactactgttgcaacgtttcgatcaagtcggcatctacgtggtcatgttt
cttgagattctgcaaacgctcatcaaggtgttgatggtattttccatattgatcatcgca
ttcggattggcattctttatactattgtctaaaggtcagcacgtctccttcaatagcata
ccaatgtccctgatgcgaactttcgccatgatgttgggcgagatagattttgtcggaacc
tacgtccaaccttactataaaccagagatggatattatcctcccattcccgatgccgact
ttcctaatactaggtgtgtttatggtcttgatgccaattctgctgatgaacttactcatc
ggtttggccgtcggggacatagagagcgtcaggaggaacgctcagctgaaacgattggct
atgcaagtggtccttcacaccgaattggaaaggcagctgccagcgattcttctggagaga
gtggacaaagacgagttgatagaatacccgaacacaaacaaatgcaaactgggatttctt
gacctcatactcaggaaatggttctgtaatccattcaccgacgacgcgggattagacctt
gtgctcgaaagtaacgaggacttcatcacggctgagttggacaaacaaaaacgtcgacta
agggaaatgtcacagctcttggaacaacaacacacgctagtccgtcttatagttcagaaa
atggagataaaaacagaggctggcgacgttgatgaaggtgtttcaccatcagaaacccgc
gtcgtgcctcgatggagttcaccgaggatccgaaaaaaattgcgcacagcgccctctttt
aataaaggcggctaa

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