KEGG   Amyelois transitella (navel orangeworm): 106133857
Entry
106133857         CDS       T09957                                 
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3
  KO
K12572  PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106133857
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atra03019]
    106133857
Messenger RNA biogenesis [BR:atra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106133857
  mRNA degradation factors
   3'-5' decay
    Pan complex
     106133857
SSDB
Motif
Pfam: Pan3_PK Pkinase
Other DBs
NCBI-GeneID: 106133857
NCBI-ProteinID: XP_013189159
LinkDB
Position
Z:join(10241879..10241953,10242021..10242107,10242245..10242367,10242658..10242745,10243507..10243626,10247006..10247104,10247430..10247669,10248028..10248182,10248740..10248861,10249670..10249772,10251324..10251460,10252279..10252357,10252560..10252675,10252962..10253124,10253499..10253615)
AA seq 607 aa
MDPSIFLQYTPPNGLPQESKLATYMNRSTSTPTRSLNQALGKLSLESSPTAIKKVLISEF
VPVNYYSPTNILPDSPESSPPSTLAAVPPNTQVHQENVGGTTYFYSTNSDSLSTSGGLNS
SSSIGGADTCLGAVGPSAAASPYASQIYAGTPTHLGPGPMTSKPGLAASFYMPETIRSEV
YQRNEDVFLQTDLRQYPDLPENVEMYSELTPLESAAPHTMATSFRATHRQSGDHYALRRL
HAYGAIVTKRLEMWKQIDHPNVVKLHDYFTTKAFGDHSMVLVYDYHPACVTLMNKYLAGG
ATNPVQDANGAFHDPFSSDPDAPRPYTHQKNAMLRAVACGALLPEAVLWSLLVQLTAALR
SIHSAGLACRTLDPTKVVMNGCRVRVAWSGCADALHTNANDVQQAQQEDLTALGRLALAL
ACRTIHCDNLSACMDLVARTYSADLKNLILYLLSTSAARRSVTDLMPMIGARFYTQVEAL
ERRADAFEDQLAREIDNGRLLRILIKLGVVNERPELNMDASWSETGDRYMLKLFRDYLFH
AVSPDGRPWLDQAHLTHCLNQLDTGSEAKVELMSRDEQSVLVVSYAELKHCLEQAFEEVM
QAAASPT
NT seq 1824 nt   +upstreamnt  +downstreamnt
atggatccctcaatatttttgcaatatacgcccccgaatgggcttccccaagagtcgaag
ttggcaacttatatgaatcgttctacgtcgactcccaccaggtctctgaaccaagcatta
ggtaagctcagcttggagtcttcccctactgccatcaaaaaggttcttattagtgaattt
gtgccggtcaactattatagtcccacaaacattctcccggactcccctgagagctcgccg
ccatccacattggctgctgttcccccaaacacacaagtgcatcaggaaaatgtaggaggt
actacatatttttactctaccaattcagacagtctgagcacatcagggggactgaattct
tcatcatctattggtggggctgacacatgtcttggcgctgtaggtccgagcgcggcggct
tcgccgtacgcctctcagatctatgctggtacaccgacacacttgggacctggtccgatg
acttctaaaccaggtctggccgcctcgttctacatgccagagacaatcagatcggaggtg
taccagagaaacgaggatgtgtttctgcagaccgatctccgtcaatatccagacttacca
gagaacgtagagatgtactcggaactgacgcccctggaatcggccgcgccccacaccatg
gctacgtcattccgcgccacgcaccgtcaaagcggcgaccattacgctttacgacgtcta
cacgcgtatggcgccatagtcaccaagcgactcgagatgtggaagcagattgaccatccc
aatgtcgtgaaactacatgattatttcacgactaaggcttttggcgaccattcgatggtg
ctagtttacgactatcatcccgcgtgcgtgaccctaatgaacaagtaccttgccggtgga
gccaccaacccggtgcaagatgccaacggagccttccacgaccccttttcttcggaccca
gacgccccacgaccgtacactcatcagaaaaacgcgatgcttcgagcggtcgcgtgtggc
gccttgctgccggaagcggtgttgtggagtcttttggtacaactcacggccgcgctaaga
tccatacactcagccggcctcgcttgcagaactctggacccgactaaagtggtgatgaat
gggtgtcgagtcagagttgcgtggagcggatgcgcggacgcactgcatactaacgccaat
gatgttcaacaggctcaacaagaagacttgacggcgctgggcaggctggcgttggctctg
gcgtgccgcaccatacactgcgacaatctctccgcttgcatggacctcgttgcgagaact
tactccgccgatctcaagaaccttatactatatttgttgtctacgtcagcggcgcgacgg
tcggtcacagatctcatgcctatgattggagcgagattttatacgcaggtggaggctcta
gaacggcgcgcggacgcattcgaggaccaactcgcccgcgaaatagacaacgggcgattg
ttacgaattctcattaaactaggagttgtcaacgagcgtcccgaattgaacatggacgcg
tcttggtcggagacgggtgaccgttacatgttgaaattgttccgagactacttgttccac
gcggtctcgcccgacggtaggccctggctcgaccaggcgcatctcacgcactgcctgaat
caactcgacactggatcggaagctaaggtggagctaatgtcgcgagacgaacaaagcgta
ctggtggtttcgtacgcggaactgaaacattgcctagagcaggcattcgaagaggtgatg
caagcggccgcgtccccaacctag

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