KEGG   Amyelois transitella (navel orangeworm): 106133895
Entry
106133895         CDS       T09957                                 
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03013  Nucleocytoplasmic transport
atra03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106133895
   03015 mRNA surveillance pathway
    106133895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atra03019]
    106133895
   03041 Spliceosome [BR:atra03041]
    106133895
Messenger RNA biogenesis [BR:atra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106133895
Spliceosome [BR:atra03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    106133895
SSDB
Motif
Pfam: PWI
Other DBs
NCBI-GeneID: 106133895
NCBI-ProteinID: XP_060800931
LinkDB
Position
7:join(5696494..5696508,5697001..5697090,5697686..5697808,5698781..5698951,5699377..5699498,5700023..5700129,5700348..5700498,5700756..5700841,5701297..5701402,5701998..5702135,5702434..5702502,5702964..5703098,5703525..5703649,5703893..5705268)
AA seq 937 aa
MMMYTGTSTDQDTRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQKITEILKM
EDDVVIDYVNNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASENGIPES
FTQQKKEEIKKRMEEQKDKEKDRRRSRSRSRSRRRSRERRRSRSRSRDRSNERKRHRNGG
SPRRSRRRSRDKSSPAKPHVDEIKLPEPKENGKSPEKNEVEEVKEEVNHNTTTESNKEEE
KVEEKTENEGQKSRSASPEKLDNEKPAEEKAVEKRRSSSERRSSSASSRGSAKKRTSSHK
KRQYRSNRDSSTSVSPRRSSRRERSKSRRRSSRRRSLDRRERERERERERERERDRERER
RRRERERRERSRERRRSLERRRRSRSRSRRRSRSRERIRRSRSRRRSRSRRRSGRLSRDR
RLSRDRRSRDRRSRDRSRDRKSKDRVTKDTRSRDRKSRDKRSSDIIKERLEKSVSIPRKE
MEKLKKKSLDRERVSISREISKDRVISSSSRESSVTRDKSASQNESKVKASHSSDEDEKE
DFITIPTLREYSKSLSRTPSPFLRKHEIENNKKADRSGDDASGKDGHVEENKTREKDPKK
GKRKHQTESESESSEEVAKSKSKAKLKRKEKATSKRSKKTKKESSSSDSESEESSSSDSE
EDRKKKSKKTSKKKLAKKSRKKRARSSSSDSSSEEDVKHKSSKSKQKNIPEESDNDKKSK
KRKDVSVERSRSEKSEAKQAKSKKVESEDSHDESSESDEKSNKKKSVKRDSSSSEKDVKR
SKKLDATKEKLISPETGKSKKGDEKTVKAKHTEEVKTKSKDESEKRGKKREKDESSSESD
QVSKKKPRKKVSESESESDSDEPKKSKKNKKHKKHSKKHKKHKKHKKASKKKDDSSDSDE
AEEEEEEGKVNNEDLEKKLRERALKSMKKQTSASGSD
NT seq 2814 nt   +upstreamnt  +downstreamnt
atgatgatgtatacgggcaccagtacggatcaagatacccgcttcagtgacaaggagaag
aagttgatgaagcaaatgaagtttggcgactgcttgacccaacaggtggacatgtccaaa
gtgaagttggatgtgctgaagccatggatcacccagaagatcacagagattttgaagatg
gaagatgatgtagtcattgactatgtcaacaatcagttggaggagaagttcccatgtcca
aagaaaatgcagatcaacttgactggatttctaaacgggaagaacgctcgcttgttcatg
ggcgagctttgggagctgctgttgagcgcgcaagcgagtgagaacgggattccggagtcg
ttcacccagcagaagaaagaagagattaagaagagaatggaagaacaaaaggacaaagag
aaggatcgccggcggtcgcggtcacggtcccgctcacgacgtcgttcccgtgagcggcgc
cgctcgcggtcacgatcgcgtgatcgctccaacgaaaggaagaggcatcgcaacggtggc
agcccgcggcgttcgcgccgccgcagccgggacaagagcagtccggccaagccgcacgtc
gacgaaatcaagctacctgaacctaaagaaaacggcaagtctcctgagaaaaatgaagtt
gaagaggtgaaagaagaagtgaaccacaacaccacgactgagtccaacaaggaggaagaa
aaagtggaggagaaaaccgaaaatgaggggcaaaagtctagatctgcgtcccctgaaaag
ttggataacgagaaacctgcagaggagaaggcggtggagaagaggcgttcgtccagcgag
cgtcgctcatcttctgcttcatcacgtgggagtgctaagaaaaggacgtcatcacacaag
aagcgccagtatcgttccaatcgagattcgtccactagtgtcagtcctaggcgcagctct
cgcagagaaaggagtaagtctcgtcgtcgtagcagccgtcgtcggtctttggatcgccgt
gagcgagaaagggagagggagcgggaacgcgagcgagagcgagatagggagagggaacgg
cgacgaagggaaagggagcgccgcgagagatcgcgcgaacgtcgccgatcgctggaaagg
cgcaggagatcgcggtctcgctctcgacgacgttcgagatctcgcgagcgcatccgccga
tcccgctctcggcgtcgctcgcgttcgcgtcgccgctcggggcgcctctcgcgcgaccgc
cgcctctcacgcgatcgccgctccagggatagacgatcaagggataggtccagggatagg
aagtccaaagacagagttacaaaggatacacggtcgcgcgataggaaatcacgcgacaag
aggtccagcgacatcatcaaggaacgtttggagaagtctgtgtccatacctaggaaagaa
atggagaaactaaagaaaaaatcgttggatcgtgaacgcgtttcaatatcaagggaaatt
tcgaaagatagagttatttccagctcaagcagagaatcttctgtaacacgcgacaaatca
gcatcacaaaacgaaagcaaggtgaaggcgtctcattcgtctgacgaagatgaaaaggaa
gattttataactattcctactttacgcgaatattcgaagagtctttctcgtaccccatcg
ccattcctaaggaaacatgagattgaaaataataaaaaagcggataggtctggtgatgat
gcttctggaaaagatggacatgttgaagaaaataaaactagagaaaaagatcccaaaaaa
ggaaaacgtaaacatcagaccgaatcagaaagcgaaagtagtgaggaagttgctaaatcc
aagagtaaagctaagcttaagcgtaaagagaaagcaacttcgaaaagaagtaagaagacc
aaaaaagagagttcttccagtgatagcgaatctgaggaatcttcatcaagcgattctgag
gaagatagaaaaaagaagagcaaaaagacatctaagaaaaaattggcaaagaaatccagg
aaaaagagggctcgttcctctagctcagattctagctcagaggaggatgttaaacataaa
agttcaaagtctaaacaaaagaacattccagaggaatctgacaacgataaaaagtctaaa
aaacgtaaagatgttagcgtggagcgctctagatcagaaaaatcggaagcaaagcaggcc
aaatccaaaaaagttgaatctgaagattctcatgatgaaagttcagaaagtgatgaaaaa
tctaataaaaagaaatctgtcaaacgggattcttctagttctgaaaaggatgtcaaacgt
agtaagaaactggacgctactaaagaaaaattgatttcacctgaaacaggaaagtcaaag
aaaggggatgaaaaaacggtaaaagccaaacacaccgaagaagttaaaacaaagtctaaa
gatgaaagtgagaagagggggaaaaaacgcgaaaaagacgagtcatcctctgagagtgat
caagtttctaaaaagaaaccaagaaaaaaggtttcagagtcggagtctgaatccgacagt
gatgagcctaaaaaatctaaaaagaacaagaagcacaagaaacactccaagaagcataag
aaacacaaaaaacataagaaggcttcaaaaaagaaggacgattcatccgacagtgatgaa
gctgaggaagaagaggaagagggtaaagtaaacaatgaggatttggagaaaaaattgcgt
gaaagagcattgaagtcaatgaagaaacagaccagtgcctctggttcagattag

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