KEGG   Amyelois transitella (navel orangeworm): 106133959
Entry
106133959         CDS       T09957                                 
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
  KO
K15166  mediator of RNA polymerase II transcription subunit 23
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atra03021]
    106133959
Transcription machinery [BR:atra03021]
 Eukaryotic type
  RNA polymerase II system
   Mediator complex
    Other mediators
     106133959
SSDB
Motif
Pfam: Med23 ATP13
Other DBs
NCBI-GeneID: 106133959
NCBI-ProteinID: XP_013189325
EnsemblRapid: LOC106133959
LinkDB
Position
Z:join(7518274..7518315,7518406..7518650,7519098..7519230,7519333..7520288,7520371..7520771,7521057..7521231,7521482..7521651,7522217..7522335,7522749..7522936,7523672..7523849,7524242..7524387,7524575..7524801,7525177..7525416,7525746..7526190,7526501..7526707,7527236..7527374)
AA seq 1336 aa
MADNQVANIVHEILRVEAVEEAFSCFLVHKPEQENERLFMYQKKLCAVMTTLSAELQESA
IRQYLSLTAVLTNRYKMKQLLTLLENLVNTNILQARMLCDCILTSDKLVYQNADYWIECF
NLIRRVIGGVDYKGVREIMKGCREKAHTLPVRLNSSTMPQLKALYSVIEYIFDRNASLLP
AYFIVTEIQKDYPDNNHWPHWQLAKLLTSFVESFKPCAQMVSIIGHSHMLPVVEFSGYAD
HLINPWRLDPTTLKFSLKGNLPYDDELLKPQIALLRHVLQQPYSRDMMCSMLGLQKQHKQ
RCIALEDQLVELMILPMERSEQENEEDEMSSTHWCWLHLSSQVIYLILIGFASFPNIVMG
LHNKLIGHDMKKGRDHLMWVLLQFISGSIQRNPLSNFLPIIKLHELLYPEKEPLPVPDCA
KAHCTHQMAVVCIWMHLLRKAETEHKTMTMPQNLKVQYEFLQHLMTSNSTPTLMGADYRI
ALLCNAYSTNNEYFARPMGIIIESLFGPQKPLPNGNPTPPLPTVPLSMCILDSLTLHCKM
SLIHSIVTHVAKLAQNKTNLPGSTMMTPALVETYSRLLVYTEIESLGIKGFIHQLLPTVF
KSHAWGILHNLLDMFSYRIHHIQPHYRVTLLSNIHSLAAYPQANQTQLQLCFESTALRLI
TSLGSSGVQLQMSRVVSEPKSLVSAESEELNRVLVLTLARGIYMTGAGSDSVAMKELLST
IMTNTPHMWSQHTLQCFPPVLVEFFAQNPAPKENKQLLKKSVDEEYRKWTSMANDNDIIS
HFSVPGTPLFLCLLWKMIFETNRINPIAFKILERIGARALSAHLRKFCDYLVFEVTNPAG
GHINKCVDAINDIIWKYNIVTIDRLVLCLVLRPNPDANESQVCLYIIQLLLLKGSELRNR
AQDFVKENSPEHWKQNNWYDKHLAFHRKYPEKFAPEESSNNAYGGPIPVYLSNVCLRFIP
VLDIVVHRHLEIPQVSKNLEQLLEHLGYLYKFHDRPVTFLYNTLHYYESKLRDKPLLKRK
LVNAVLGSLKDVRPSGWATTEAFQTYLGKPDTDATGWAPDLNYYLGLVNRMVDTMTGNSH
FPNTDWRFNEYPNPSAHSLYVTCVELMSLPLAPNIVANNLLDVITKGFVVIPATKIQLWI
NAIGLIMAALPDPYWTVLHERILELITHSDMTEWPFPYTPFQLFNLSTTKEAMLENKYSL
TLALAHAVWYHAGAGQIMQVPVFVKEKLSPEINSEIQLIFLCHLVGPFLQRFNSDMSRTV
MDITVTLYELLAHIDKSQPHLQYIDPLCDLLYHIKYMFVGDTLKNEVESVIRKLRPALQM
RLRFITHLNVEQINTA
NT seq 4011 nt   +upstreamnt  +downstreamnt
atggcagataaccaagtagccaacattgttcatgaaatactgcgtgtagaggcagtggaa
gaggcattcagttgtttcttggttcacaagcctgaacaagaaaatgagagactgttcatg
taccagaagaagttgtgtgctgtcatgactacattgagtgccgagctacaagagtcagca
atcagacagtacctcagtttgacagcagttttaacaaatagatataaaatgaagcaactt
ctcacacttctagaaaacctggtgaatactaacattttacaagcaagaatgttgtgtgac
tgcatactaactagtgataagctggtatatcaaaatgctgactattggattgaatgtttc
aatttgattaggagggtaattggtggtgttgattataaaggagtgagggaaataatgaaa
ggatgcagagaaaaagctcatacattaccagtacggttaaattctagcacaatgcctcag
ctaaaagcattatatagtgtaatagagtacatatttgatagaaatgcatcattgctacca
gcctactttattgtgacagaaattcagaaagactatcccgataacaaccactggccacac
tggcaactagccaagttattaacaagctttgtagaaagttttaagccctgtgctcaaatg
gtgtcaataatagggcactcgcacatgctcccggtagtagagttctctggatatgcagat
cacttaataaatccatggcggttagacccaactactctaaaattttcactaaaaggtaat
ttgccatatgatgacgaattgttaaagccacagattgcattgctgaggcatgttctacaa
caaccatattctagagacatgatgtgttccatgctggggttgcaaaaacagcataagcag
cgttgtatcgcattagaagatcagttagtagagctcatgattttaccaatggaaagaagt
gaacaggaaaatgaagaagacgagatgtcatcaacacactggtgctggcttcatttgtca
tcccaagtgatatacctgatattgattggctttgcttcatttccaaacatagtcatgggc
ctgcacaacaaattgataggtcacgatatgaagaaaggccgcgatcatctcatgtgggtc
ctcctccagtttatttcaggaagtatacagaggaatcctttgtctaatttcctacccata
attaaattacatgaacttttataccctgaaaaagagccgttgcctgtaccagactgcgcc
aaagcgcattgcactcatcaaatggcagttgtttgcatttggatgcacttacttaggaaa
gcagaaacagaacataaaactatgacaatgccacaaaacttgaaagtacaatatgaattt
cttcaacacctcatgacatcaaacagtactcctactttgatgggagctgactatcgcatt
gctttgctatgtaatgcctactcaaccaataacgaatattttgcgagaccgatgggcatc
ataatagaatcgctgtttggtcctcagaaacctttaccgaacgggaatcctacaccgcca
ctacccactgttcccctgtctatgtgcatactcgatagcttgacattacattgtaagatg
tcgttgattcactccatagtgacgcacgtcgctaagttggcccagaataaaaccaattta
cccggtagtacaatgatgacgcccgctttagtggaaacatacagccgattactagtatat
actgaaattgagtcactgggaattaaaggattcatacatcagctgttgcccacggtattc
aaatctcatgcgtggggaattctgcacaaccttctagacatgttttcgtaccgcatccac
catatacaaccgcattacagagtgactctgttatccaacatacattctctcgcagcttat
ccacaagctaatcagacacaattgcagctttgtttcgaaagtacggcccttcgtctgatt
acgagccttggcagctctggcgttcagctgcaaatgtcgagggtggtttcggaacccaaa
tcgttggtttctgccgagagtgaggagttgaaccgtgtgctggtcctcaccttagcgcgc
ggcatctatatgactggcgcaggcagcgatagcgtggccatgaaggaactgctgtccacg
atcatgacgaacacgccgcacatgtggtcacaacacactctgcagtgctttccaccggtg
ttggtcgagtttttcgcacagaatcccgcgccgaaagagaacaaacaattgttgaagaaa
tcagtggacgaggagtatcgcaaatggacgtcgatggccaacgacaacgacatcatatcg
catttctccgtgccaggcacgccgctattcttgtgtttgctttggaagatgatctttgag
accaataggattaatcctatcgctttcaagattttagagcggatcggcgctcgagcacta
tcagcgcacttacgcaaattctgcgactacctagtgttcgaggtaaccaacccggccggc
ggacacatcaacaagtgcgtcgacgccatcaacgacatcatctggaagtacaacatcgtc
actattgacaggctggttttgtgcttagtactgcgacccaaccccgatgcgaatgagagt
caagtatgcctctacattatacagttgttgcttctgaagggctccgaactgaggaaccga
gcccaagacttcgtcaaggaaaactcgcctgagcattggaaacagaataattggtacgat
aagcacttagcattccataggaaatatccagaaaaattcgcaccagaagagtcaagcaat
aatgcttacggcggtcccataccggtttacctgagcaacgtctgtctcaggttcattccc
gtgctagacatagtcgtacacagacatctggaaattccccaggtcagcaaaaacctggaa
caactactggaacatctgggatacctttataaattccatgaccgcccagtaacattcctt
tacaacacattgcactattatgagtcgaaactaagggataaaccgttattgaagaggaaa
ctcgtgaatgcggtcctagggtccctaaaagatgttaggccatcaggatgggccaccact
gaagccttccagacttatttggggaagcccgacacggatgccacaggttgggcgcccgac
ctgaattactatttgggtctcgtcaacagaatggtagacaccatgaccgggaactctcac
ttcccaaacacagactggcgattcaacgagtaccccaacccttcagcgcattcactctac
gtgacttgcgtagaactcatgtcactaccgctagctcctaacatcgtcgctaacaacctg
ctagacgtcattacaaaaggattcgtcgttatcccggcaacaaaaattcaactctggata
aacgccataggactcataatggccgccctacctgatccttattggacagttttacacgag
aggattctagaattgatcacgcattccgatatgacggagtggccgttcccgtatacgcca
ttccagctgttcaacttgtcaactaccaaagaggcgatgctggaaaataaatacagcctt
acattagcgttggctcatgccgtttggtatcacgccggagcgggacagatcatgcaagta
ccagtattcgtaaaagagaaactttctcccgagataaacagtgaaatccagctgattttc
ctgtgccacctagttggtccgttcctccaaaggttcaactctgacatgtctcgcacagtc
atggatatcaccgtgacgttgtacgaacttctcgcgcacatagacaagtcgcagccccat
ctacaatacatagacccgctgtgcgacttgctttaccacattaaatatatgtttgtcggt
gacacgttgaagaatgaagtggagagcgtaattcgaaaattgcgtccggctcttcagatg
cgacttcggttcatcacacacttgaatgtggaacaaataaataccgcctag

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