Amyelois transitella (navel orangeworm): 106134059
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Entry
106134059 CDS
T09957
Name
(RefSeq) homeobox protein caupolican isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atra03000
]
106134059
Transcription factors [BR:
atra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
106134059
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
106134059
NCBI-ProteinID:
XP_013189469
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All DBs
Position
Z:complement(join(9015724..9016238,9016367..9016665,9037193..9037302,9041037..9041369,9056004..9056045))
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AA seq
432 aa
AA seq
DB search
MTSQFAFRGSPPNQSTISTASNSPPPAQAGMSSGGGASGAGRASSPAAAAPRCCDTGRPI
FQDPITGQTVCSCQYEFLNYQRLASGVPLSMYSAPYSDAAAATAAGMAAYFPALAADQPP
FYTNAAAGIELKENLAASAASWPYPTVYHPYDAAFAGYPFNGYGMDLNGARRKNATRETT
STLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPRNRV
DDDDNNNDDDDHKSNDGKDALDGKDSGTGSSEDGDRPQQRLDLLGQRTESEWSESRADSG
PESPEPYERPIHPAYQHLPSRAPPGSTPASTKPRIWSLADMASKDGESPAPPSSASAFYQ
SAAAAAAARLAHPYSRPDLYRGLYPPTHPADVALLEYSRSLAMQAAPAPAPPAPSPSSSS
TSSLAEPPPSRA
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccaattcgcctttagaggatctcccccaaatcagagcaccatatcgacagcc
tcaaacagtccgccgccggcgcaagcgggaatgagcagcggaggaggggcgagcggcgcg
ggtcgggcgagttctccggcggcggcggccccgcggtgctgcgacaccggccgcccgata
ttccaggacccgatcactggccagacggtctgctcgtgccagtacgagttcctcaactac
cagaggctggcgtcgggggtaccgctgtccatgtacagcgccccgtactccgacgctgcc
gccgccaccgccgcgggcatggccgcctacttcccggcgctcgccgctgaccagccccca
ttttacacaaatgctgctgcaggcatcgagctgaaagagaacctggcagcgagcgcagcc
agctggccttatcccactgtttatcacccctacgacgcggccttcgcgggataccctttt
aatgggtacggaatggacctaaatggagctaggagaaaaaacgccacacgggaaacgacc
agcacactgaaagcgtggctcaatgaacataagaaaaacccgtatccgacgaaaggagag
aaaattatgctcgcgataatcaccaagatgacgctgacgcaggtatcgacgtggtttgcg
aacgcgcgccggcgactaaagaaggagaacaagatgacgtgggagccgagaaacagggtc
gacgatgatgacaataacaatgacgatgatgatcacaaaagcaatgatggaaaagacgct
ttagatgggaaagactccggcacaggatcgagtgaagacggggaccggccacagcaaaga
ctagacttgctcggacaaagaacggaatcggaatggtcagagtctcgggctgatagtggt
cctgagtcaccagagccatacgagaggccgatacatcctgcttaccagcatttgccgtcg
cgtgcgccaccaggtagcactcccgcttctactaaacccagaatatggtccctcgcagac
atggccagcaaagatggcgagtcgccggcaccgccttcgtctgcttcagcattctatcag
tcggcagcggcggcggcggcggcgcggctcgctcatccttatagcagaccggatttgtac
cgaggcttgtatcccccgacacaccccgctgacgtggctcttttagaatactcccgctca
ctagcaatgcaggccgcaccagcgccggcgccgccagcaccctcgccgtcctcgtcgtcc
acctcctcgttggccgagcctcccccctcccgcgcctga
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