Amyelois transitella (navel orangeworm): 106134087
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Entry
106134087 CDS
T09957
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atra03009
]
106134087
Enzymes [BR:
atra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106134087
Ribosome biogenesis [BR:
atra03009
]
Eukaryotic type
90S particles
Helicases
106134087
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
DUF6291
Neuropeptide_S
Motif
Other DBs
NCBI-GeneID:
106134087
NCBI-ProteinID:
XP_013189499
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All DBs
Position
8:complement(join(11899383..11899530,11899817..11901972,11902090..11902233))
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AA seq
815 aa
AA seq
DB search
MSKLTMTKKDENDKKNSKKNKIRLYKPKKKKSTEEGAAIQYLQAQYEKIVPDEIKTFKDF
PISQKTLKGLKDNNYIIPTEIQRQAIGYALQGKDILGAAKTGSGKTLAFLVPILELLFCK
KWTRYDGVGAIVISPTRELAYQIYETLRKIGHYHDFSAGLIIGGQNLKFERKRMDQINIL
ICTPGRLLQHMDENPLFNCHQMQILVLDEADRCLDLGFAQAMNAIIENLPTERQTLLFSA
TQTKSVKDLARLSLSFPTYVAPHEQADTVTPESLQQSYIVCDLDEKMAILWSFIRNHLKQ
KVLVFMATCKQVKYTYQLFCKLRPGVSLLALYGSLHQEKREKIYNEFCRKSNVVLFATDL
ASRGLDFPRVNWVIQMDCPEDVETYIHRAGRTARGVFGKGEGLLMLLPHEEKIVEDLKKS
KIPINKIAIDPSKVVLPEKKIEGLVSFNSDLKKSAQRAFISYVRSVFLMKNKDIFNVQLL
DTDAYGRSLGLVVPPSIKFLHRNNKNVIETQKENDKEDDDLIDKLNAAGKIPGDSESDHD
NDIVIENTDDLKEIKKRHKKKLEKFEFHKSDVDHDNFIQVTKLDVNVEGDIVEPQEIDSI
KKTKSLSEEAVVRNMLKNQVNVNTKVKFTEEGDTVERDTVEDETEDVKSYFGNQIENENI
QPGLYLEKTKETVQEEDKVDKMQFREKVQTKHREKKRKLKNKKKEDVGEKDDFGSQSESD
GPDLSWLPDPDQVYGKADGSDEESDYDGRDISDDDESSEEEEEEFYRPTKRKLLEKNSIP
PESVVPRKIKKVEDISKTLSVQEAEALAMQLLQKK
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaattaacaatgacgaaaaaagatgagaatgataaaaagaattccaagaaaaat
aagatccgcctttacaaaccgaaaaagaagaagagtaccgaggaaggtgcagcaatacaa
tatttgcaggcgcagtatgaaaaaatagtaccagatgaaataaaaacattcaaagatttc
ccaatctcccaaaagacattgaaaggcctgaaagataacaactacattattccgacagaa
atccaacgacaggcaattggttacgcacttcagggcaaagatattctgggagctgccaag
accggctctgggaaaacattggctttcttagttccgatactcgaattgttattttgtaag
aaatggacacgatatgacggggttggagccattgtcatttctccaacaagagaattggcc
tatcagatatatgaaaccttaaggaaaataggacactaccatgacttctcagctggcctg
ataattggaggtcaaaatctcaagtttgaaaggaagcgaatggatcaaataaatatttta
atttgcacacctggacgattacttcaacacatggatgaaaatcctttatttaactgtcat
cagatgcaaatcttagtgctggacgaggctgatagatgtttggacctgggtttcgcacaa
gcaatgaatgctattatagaaaatcttccaacagaaaggcaaaccctattgttctcagca
actcagactaaatctgtcaaagacctagctcggctcagcttgtcattcccgacatatgtg
gctccacatgaacaggctgatacagtcactccagagtcattacaacaaagttatattgtg
tgtgatttggatgaaaagatggccatcctttggtcatttataagaaaccatttgaagcaa
aaagttttagtgttcatggctacttgcaaacaagtcaaatacacctaccagttgttctgt
aaactccgacctggtgtcagcctgctcgctctttatggatcacttcatcaagaaaaaaga
gaaaaaatttacaatgaattttgtagaaaatcaaatgtagttttgtttgctacagatttg
gcttcacgtggattagatttccccagagttaactgggtgattcagatggattgtcctgaa
gatgtggagacatacattcacagagccggccgcactgcacgtggggtgtttggcaaaggt
gaaggtctgctaatgttactaccccatgaagagaaaatagttgaagatttaaagaaaagc
aaaattcctattaataaaatagctatagatccatcaaaagttgtattgcccgagaaaaaa
attgaaggtttagtgtctttcaattcagacctgaaaaagagtgctcagagagcatttatt
agttatgtcagatctgtcttcctcatgaaaaataaggatatttttaatgtacaactattg
gatacagatgcctatggaagatctttaggattagttgttcctccaagcataaaattcctg
cacagaaataataagaatgtaattgagactcaaaaagaaaatgataaagaagatgatgac
ctcatagataaattgaatgctgcaggtaaaatacctggtgacagtgaatcagatcatgat
aacgatatagtaatagagaatacagatgatttaaaagaaattaaaaagagacacaagaaa
aaactagagaagtttgaatttcataaaagtgatgttgatcacgacaatttcattcaagtc
acgaagttagatgtaaatgttgaaggtgatattgtagaaccacaagaaattgattcaatt
aagaaaacaaaatcattgtctgaagaggctgttgttagaaatatgcttaaaaatcaagtt
aatgttaacactaaagtgaagttcacagaagagggagacacagtagagagagacacagta
gaagatgagacagaagatgtgaagtcctattttggaaatcaaattgagaatgagaatata
caacctgggctttatttagagaaaaccaaagaaacggtgcaggaggaagacaaggtcgat
aagatgcagtttagagaaaaagtgcagacaaagcatagagaaaagaagaggaaattgaag
aataaaaagaaagaagatgtaggtgaaaaggatgactttggatcacagtctgaatcagat
gggccggatctctcatggttgccggaccctgaccaagtgtatggaaaggctgacggcagt
gatgaagaatctgattatgacgggagggatatatcagatgatgacgagtcatctgaagag
gaggaagaagagttctacaggcctacaaagcggaaactcctagagaagaacagcatcccg
ccggagagtgtggtcccgcggaaaatcaagaaggtggaagatatctcgaaaacactctcc
gtgcaagaggcagaggcgctggccatgcagcttctacagaaaaagtag
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