KEGG   Amyelois transitella (navel orangeworm): 106134215
Entry
106134215         CDS       T09957                                 
Name
(RefSeq) NPC intracellular cholesterol transporter 1
  KO
K12385  Niemann-Pick C1 protein
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03265  Virion - Ebolavirus, Lyssavirus and Morbillivirus
atra04142  Lysosome
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
    106134215
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    106134215
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:atra02000]
    106134215
Transporters [BR:atra02000]
 Solute carrier family (SLC)
  SLC65: NPC-type cholesterol transporter
   106134215
SSDB
Motif
Pfam: NPC1_N NPC1_MLD Sterol-sensing Patched MMPL ACR_tran Folate_rec
Other DBs
NCBI-GeneID: 106134215
NCBI-ProteinID: XP_060804924
LinkDB
Position
17:join(8633648..8633725,8650188..8650310,8660548..8660767,8660994..8661073,8661718..8661930,8662570..8662762,8664903..8664974,8665951..8666142,8666598..8666876,8667168..8667354,8668007..8668172,8668538..8668799,8669497..8669698,8670807..8671007,8672879..8673050,8674161..8674383,8674916..8675047,8675632..8675899,8676679..8676895,8677949..8678044,8678603..8678797,8679565..8679652,8681104..8681237)
AA seq 1330 aa
MAGVCAYFLRFLPVVGCLLLIHLAEYVPTASAEGHCIWYGVCTNATQTKKVNCYYDGPAK
PIEESTRSIIQKYCPDIAAGGLACCNSDQLINLNNNIGMAENILARCPTCMENFIKHICG
LTCAPNQSEFIKPVKMGPYNTTHKQILEIDYHLSTTYMESTYNSCSQVQVPASNQLAMDF
MCGSWSAAYCSPQRWFDSMGDASSAFVPFQINYISGNEPVDGMIPNNPPTRPCNVGSNGQ
PGCSCLDCAASCPAPPPPRPAPRPFSIHGADGYAVVMAIVFVIFTTLFLSGVYCCNQQEN
PVDVWARAAEARRGGPETSPLHSHRSSVASDTNQEMSGNPPAGWSGEQADEPVDATFFEK
LGAKTESTLEDFFEWWGNIMATRPWVVLFLGLVFIVALGYGMSYTQLTTNPVELWASPYS
RSRQEREYFDSHFEPFYRTEMVIISSKGLPYIEHETPSGNLTFGPVFNATFMLEVLNLQN
KIMALNNGVGIEEICFAPLSSDFTGPTTPEQCVVQSVWGWWENDADEFEMDIEDNQYLDK
IASCANNPYSCLAPYGGPVLPAVALGGFLRPGQQLAKTSPFHEATSLIITILVNNKHDKE
KLKPALQWEKEFISFMKNYTETSMPSYMDIAYTSERSIEDELDRESQSDVSTILVSYFIM
FAYISISLGRFTSFSRLLIDSKVTLGLGGVLIVLASVVCSVGIFGYAGVPATMIIVEVIP
FLVLAVGVDNIFILVQTNQREGRRPNETVAEHIGRTLGQVGPSMFLTSVSESVCFFLGAL
SDMPAVRAFALYAGAALLVDFLLQATCFVALLAIDTQRQNGNRFDIVCCVQGAKATEGNA
AGEGALYNLFKQIYVPFLMKREVRASVMIIFFAWLCSSVAVAPHIEIGLDQELSMPQDSF
QLKYFQHLNKYLNIGPPVYFVITEGLDFSETKTQNMVCGTRFCRSDSVAMQLYSAYRTPN
ETYIAQPPNSWLDDFFDWAALASCCKYFPGNGTFCPNSGVPSCKSCNIPLVGPEQRPDSS
DFQRYVPFFLQDNPNTGCAKGGHAAYSHAVNYKQINTNASRVGATYYQGYHTVLKTSYDY
YSALKGARSVAANLTETLNRNLREEGKNTTVNVFPYSVFYVFYEQYLTMWPDTLKSMGIS
VLSIFIVTFLLMGFDLFSALVVVITITMIVVNLGGLMYWWGVSLNAVSLVNLVMAVGIAV
EFCSHLVHSFSASRASGRIARAADSLAKMGSSVLSGITLTKFGGIIVLGTAKSQIFQVFY
FRMYLGIVVVGAAHGLVFLPVMLSYIGSPMNKQKLANQMRRGKEMTVAETSLTRVRDASG
HRYTYVQSVA
NT seq 3993 nt   +upstreamnt  +downstreamnt
atggctggtgtttgtgcatatttcttacgatttctacccgtcgtggggtgccttcttctg
attcatttagcagaatatgtgcctactgcatcagcggaaggccactgcatatggtatggt
gtgtgtaccaacgcgacccaaacgaagaaggttaactgctattacgatggaccggccaag
cctattgaagagtcaactaggtcgatcatccaaaagtactgcccggacatcgctgccggc
ggcctcgcgtgctgcaacagcgaccagctcatcaacttgaataacaacatcggcatggcc
gagaacattctggcaagatgtccgacctgcatggagaacttcatcaaacacatttgcggg
ttgacctgcgcccccaaccagagcgagttcatcaagcctgtcaaaatgggaccttacaat
acaactcacaaacaaatattggagatcgactaccatctcagtacgacctacatggagtcg
acatacaactcatgctcacaggtgcaagtgccagccagtaatcagctcgcaatggacttc
atgtgcggctcgtggagcgccgcctattgcagcccccagcgctggttcgattccatggga
gacgccagctccgccttcgttccgttccagatcaactacataagtgggaatgaaccagtt
gacggaatgataccaaataaccccccgactaggccctgcaatgttggcagtaatggccag
cccggctgctcgtgcctggactgcgcggcgtcgtgcccggcgccgccgcccccgcgcccc
gcgccgcgccccttcagcatccacggcgcggacggctacgcggtggtgatggcgatcgtg
ttcgtcatcttcaccacgctgttcctaagcggcgtgtactgctgcaaccagcaggagaat
cctgtcgacgtgtgggcgcgcgccgcggaggccaggcgaggggggcccgaaaccagcccg
ctacacagccatcggtccagtgtcgcttcggacaccaatcaggaaatgtcggggaacccc
cccgccggctggagcggcgagcaggcggacgagcccgtggacgcgaccttcttcgagaag
ctcggcgccaagactgagagcacgctcgaggacttcttcgagtggtgggggaacatcatg
gctactagaccgtgggtggttctgtttttgggtctcgtgttcatagtcgcgctcggctac
ggcatgtcctacactcaactgaccaccaacccggtggaactgtgggcgtccccgtactcc
cgatcccgtcaggagagggagtacttcgattcccacttcgagccattctaccgcactgag
atggtcatcatcagttctaaaggcctgccgtatatagaacatgagacaccgtctggcaat
ttgacgtttggaccagttttcaacgctacgttcatgttggaggttctcaatctgcagaat
aagataatggctctgaacaacggcgtgggtatcgaggagatttgcttcgctccgctatcg
agtgacttcaccgggcccaccactcccgagcaatgcgtggtgcagtctgtgtggggatgg
tgggagaacgacgcggatgagtttgaaatggacatagaggataatcaatatttggacaaa
atcgcctcttgcgccaataacccgtactcgtgcctggcgccgtacggcgggcccgtgctg
ccggccgtggcgctgggcggcttcctgcggcccggccagcagctcgccaagacctcgccc
ttccacgaggccacctcgctcatcatcaccatactagtcaacaataaacacgacaaggag
aagctcaagccagcgttgcaatgggagaaggaatttatcagtttcatgaagaattacact
gaaacctccatgccttcttacatggacatagcgtacacttcagaacggtccatagaagac
gaactggacagagaatcacaatcagatgtgtcgactatattagtgtcatactttattatg
ttcgcgtatatatctatatcgcttgggaggtttacgagcttctcaagactgctgattgat
agcaaggttacgcttggacttggaggcgtcctcatagttctagcttcggtagtgtgctca
gtgggtatattcggctacgcgggcgtcccggccactatgatcattgttgaggtcataccg
ttcttggtgctggccgtgggagtggacaatatcttcatcctggtgcaaaccaaccagagg
gagggcaggaggcccaatgaaactgtggcggaacatatcgggaggacactgggccaggtg
ggcccgtccatgttcctgacgtcggtgtcggagtcggtgtgcttcttcctgggcgcgctc
agcgacatgccggccgtgcgcgccttcgcgctgtacgcgggcgccgcgctgctggtggac
ttcctgctgcaggccacctgcttcgtggcgctgctggccatcgacacgcagcgccagaac
ggcaacagattcgacatagtctgctgcgtgcaaggcgccaaagcgactgaaggcaacgct
gccggcgagggcgctttatacaatctgttcaagcagatttacgtgcctttcctcatgaag
agagaagtcagggcttcagtcatgatcatattcttcgcgtggctctgttcctctgtggct
gtggcgccacatatagaaataggtctcgaccaagagctatcaatgccccaagacagcttc
caactgaaatacttccagcatttgaacaagtatctgaacatcggcccgccagtgtacttt
gttataacagaaggtttggacttctcggagaccaagacacagaatatggtctgcggaaca
aggttctgtaggtctgacagtgttgccatgcaactttattccgcataccgcacaccaaac
gagacgtacatagcccagcctcccaattcgtggctggatgacttcttcgactgggccgcg
ctcgcgtcctgctgcaagtacttcccggggaacggcactttctgtcctaattcaggcgtg
ccaagctgcaaaagctgcaacatcccgctggtgggtccagaacagcgccccgactcctcg
gacttccagcgctacgtgccgttcttccttcaggacaaccccaacactggatgcgccaaa
ggggggcacgctgcctactcgcacgcggtcaattataaacagatcaatacgaacgcatct
agagttggagccacttattaccagggttatcatactgtcttgaagaccagttatgattac
tattcggcgctgaaaggggccaggtccgtcgcagcgaatctaaccgaaacgctgaaccgt
aatctcagagaggaggggaagaacacaacagtgaacgtgttcccttactcggtgttctac
gtcttctacgagcagtacctcaccatgtggcctgacacattgaagtctatgggcatatct
gtactgtctatatttatcgtgactttcttactgatgggattcgatctgttctcagctttg
gtggtagtgataacgatcaccatgatcgtggtgaacctcggcgggctgatgtattggtgg
ggagtcagtttgaatgcagtatctctagtcaatttggtgatggcagtaggcatagcggtg
gagttctgttctcacttggtgcacagtttctcagcctctagggcttcgggtcgcattgct
cgagcggcggattccttggccaagatgggctcctcggtacttagcggcattacattgacc
aagtttggtggaatcatcgtgctgggcacggctaagagccagatcttccaggtgttctac
ttccgcatgtacctgggcatcgtggtggtgggcgcggcgcacgggctcgtgttcctgccc
gtcatgctcagctatatcggttcgccgatgaacaagcaaaaactggccaatcagatgcgg
cgcgggaaggagatgaccgtagcggaaacctcgctcactcgagtaagagacgcaagtgga
cacagatatacttatgtacagagtgtggcgtag

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