Amyelois transitella (navel orangeworm): 106134227
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Entry
106134227 CDS
T09957
Name
(RefSeq) COP9 signalosome complex subunit 4
KO
K12178
COP9 signalosome complex subunit 4
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atra04121
]
106134227
Ubiquitin system [BR:
atra04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
106134227
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Gene cluster
GFIT
Motif
Pfam:
PSMD12-CSN4_N
CSN4_RPN5_eIF3a
PCI
RPN7
TPR_19
TPR_7
Ribonuc_red_lgN
Motif
Other DBs
NCBI-GeneID:
106134227
NCBI-ProteinID:
XP_060804748
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All DBs
Position
17:join(7622786..7622862,7622982..7623061,7623303..7623454,7623687..7623790,7624054..7624239,7626870..7626988,7627509..7627663,7628214..7628430,7629368..7629501)
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AA seq
407 aa
AA seq
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MNLQGVRQYLNELRNSGGLHRDQAVKYRNVLMEILKNPEGELADCLKAFVEAIVNENVSL
VISRQLLTDVSSHLALLPDNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERNQN
WKEAANVLVGIPLETGQKQYSVDYKLETYLKIARLFLEVDDPVQAEAYVNRASLLQAETT
NEQLQIYYKVCYARVLDYRRKFIEAAQRYNELSYRNIIHEDERMTCLRNALICTVLASAG
QQRSRMLATLFKDERCQQLPAYSILEKMYLDRIIRRSELHEFEALMQTHQKATTSDGSTI
LDRAVFEHNLLSASKLYNNITFDELGALLETPPARAERIASHMISEGRMNGYIDQISSVV
HFETREILPQWDKQIQSLCYQVNSLIEKIAAAEPEWMAKLMEEEMIQ
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacaaggagttcgccaatatctaaatgaacttagaaattccggtggtcttcac
agagatcaagcagtgaaataccgcaatgttctcatggagatacttaaaaatccggaagga
gagttggctgactgtttgaaagcatttgttgaagcaattgtcaatgaaaatgtaagtttg
gtgatatcccggcagctcctcacagacgtcagctcccatctggccctgttgcccgacaat
gtgtcacaggaggtttcacattttgcccttgatgtcattcagcctcgggtcatctctttt
gaagaacaggtagctagcattagacagcatttggcagatatttatgagaggaatcaaaat
tggaaggaagctgcaaatgttctggtggggatcccactggaaactggacaaaagcaatat
tcagtggactacaagctggagacatacctcaagatagcacgtctgttcctggaggtcgat
gacccggtgcaggcagaggcctacgtgaacagagcctcccttctgcaagctgagaccacc
aatgaacaactgcagatatattacaaagtgtgctatgcaagggtgttggattacaggagg
aagttcatagaagcagctcagaggtacaatgagctctcttaccgcaacatcatacacgag
gatgaacggatgacttgtctgaggaatgcgctcatctgtacagttttggcttcagctggc
caacagcgttccagaatgctagcgactctgttcaaagacgagcggtgtcaacaattgcca
gcgtactccatcctcgagaagatgtacctggaccgcatcatccgccgctcggagcttcac
gagttcgaggcgttgatgcagacacaccaaaaggcgacgacatctgacggctccacgatc
ctggaccgcgcggtgttcgagcacaacctgctgtcggccagcaagctgtacaacaacatc
acgttcgacgagctcggcgcgctgctcgagacgccgcccgcgcgcgccgagcgcatcgcc
agccacatgatcagcgagggccgcatgaacgggtacattgaccagatcagctccgtcgtt
cacttcgagactcgcgaaatcctgcctcagtgggacaagcagatccaaagcctgtgctac
caagtgaacagccttatagagaagattgcagctgcggagccggagtggatggccaaactc
atggaggaagagatgatacaatag
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