Amyelois transitella (navel orangeworm): 106134332
Help
Entry
106134332 CDS
T09957
Name
(RefSeq) putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atra03036
]
106134332
Chromosome and associated proteins [BR:
atra03036
]
Eukaryotic type
Gene silencing
Transposable elements
106134332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_4
DDE_Tnp_1
Plant_tran
Motif
Other DBs
NCBI-GeneID:
106134332
NCBI-ProteinID:
XP_060810206
LinkDB
All DBs
Position
W:complement(join(9452276..9452394,9452543..9452812,9452928..9453069,9453152..9453287,9453572..9453762,9453860..9454108))
Genome browser
AA seq
368 aa
AA seq
DB search
MTMAARNFFAWKLLMAAETQDSRNQLRQKRRACRSSFNPLWDISEVEFRNRYRLSKEAFL
FLCEELKHLTTLKKTLQISLQEKVLVALFFYATGSYQRPIGVAKSLCQKMCSVYIQEVTQ
ALNHPAMLEKYISFPKTLADRQAVSHKFFTKYGLPGVIGCIDGSHFKIFGPPSAEEHLYY
CRKHYHSINVQMVCDSDCRIINVNAKFGGQNHDAFIWENSNVNTYMQHLHNRGEIFWLLG
DSGYPQRPWLMIPFLEVHPGSPEANYNQKHMRARVLIENTFGRLKNRWRCLCKDRVLHYK
PEKCAQIIQACCVLHNIALDYRVAEPHNYDFNVPPQPIEHLRETRISNELIRGRAYRDQL
VRKLQNSQ
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggcagcacgtaatttttttgcctggaagttattaatggctgcagaaactcaa
gacagcagaaatcaacttcggcaaaaacgacgagcttgccgttcgtcttttaatccccta
tgggatattagtgaagtggagtttagaaatagatatcgcttatcaaaggaagcatttcta
tttctttgtgaagaactaaaacatttaacaaccctaaagaaaacgctgcaaattagtctt
caggaaaaggttctggttgcactatttttctatgcaaccgggtcttaccagcgtcctata
ggagtggctaaaagtctatgccaaaagatgtgtagcgtttacattcaggaggtaacacag
gcccttaatcatcctgcgatgcttgaaaagtacatatcttttccaaagacacttgcagac
agacaagcagtcagtcacaaattttttacaaagtatggcttgccaggtgtgattgggtgc
attgatggcagtcatttcaaaatatttggacctccaagtgcagaggaacatttatattat
tgtcgaaaacattaccattcaataaatgtgcagatggtgtgtgatagtgattgcagaatt
ataaatgtaaatgctaaatttggagggcaaaatcatgatgcgttcatttgggagaacagt
aatgttaacacctacatgcaacatcttcataacaggggtgaaatattttggctcttaggc
gactctggttatcctcaacgtccatggttgatgattccatttctggaggtgcacccaggg
tcaccagaagcaaattataaccaaaaacatatgagagctagagtgctcatagaaaatacc
tttggaagattgaagaaccgatggcgatgcttatgcaaagatagagtcctacattataag
cctgaaaagtgtgcacaaataatacaggcttgttgtgtactacacaatattgcacttgat
tacagggtagcagaaccacataattatgatttcaatgtacctccccagccgattgaacat
ctcagggaaacaagaatctcaaatgaattaatacgaggaagggcttatagggatcaatta
gttagaaaactacagaattcacaataa
DBGET
integrated database retrieval system
