KEGG   Amyelois transitella (navel orangeworm): 106134341
Entry
106134341         CDS       T09957                                 
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial isoform X1
  KO
K10908  DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6]
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:atra03029]
    106134341
Enzymes [BR:atra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     106134341
Mitochondrial biogenesis [BR:atra03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial RNA polymerase
    106134341
SSDB
Motif
Pfam: RNA_pol RPOL_N PPR_2 PPR_3 PPR TPR_24 Zn_ribbon_FGT1_1
Other DBs
NCBI-GeneID: 106134341
NCBI-ProteinID: XP_013189813
LinkDB
Position
17:join(7757478..7757625,7757757..7757861,7757944..7758511,7758723..7758851,7759275..7759449,7760399..7760509,7760715..7760876,7761299..7761463,7761938..7762102,7762607..7762747,7763064..7763182,7763563..7763737,7764071..7764189,7764566..7764781,7764981..7765130,7765391..7765582,7765977..7766186,7766681..7766835,7767281..7767432,7767843..7768002,7768536..7768665,7769425..7769547,7770127..7770298,7770746..7770837,7771143..7771269)
AA seq 1386 aa
MHRLISAKNIYRNTFHGLSLPGSNSLNNTPISEIQCAGCRKILLTGKSSENLVRHQSTRT
VSVLRSSRKKTKHKNYKKYGELLEVGNSMTETKVSISKLHASHLSKLASSPVSLGQLHQL
TNKPLKKFSHLKEVDPELLQSVRDKILKKPVSTVSKEVVLEDDKCALVYTTHQLSSVERF
KTKQYIGMVKDSYYNFRKATLYDQRLQDLRYAINEGLNQEFDLHETKNEDVKPNSTMGSH
ELPKSPHAVFRELFVDNQLDSYDQELLTHITNMQRQGIAHPALEDLCEDSIINEGEAHED
FDHVNPVPAKTLKIKAARAALRKKKKAKRDKRRALQELNMKEDMKDLVRRGKQDALHQLL
TAHLNLLCSLNMVHEGRQILHYYRQKSCRTPDIGKISDVKIYNTLLHGYALLGQIENVKE
LLMTMSEDGIEPNAQTYAAVFESIERCERDDKLTLLNFFNKSMEEKGINLNDLMDKTKFL
NDQRAVVLKAIRRIQPGFEPVYTPPVLDYDCRLLDDLTLDKVEGRLGLLKSPAEGVVTLD
EIHGLGKLQLDTEIKGEIEVENIDVKDESSPHVKFCREKWNETESEWRVAIREAFVRNLG
TLKSQSVASQSAITLYPYLRVLEVDQFVELIMGEIRKLVDGSETYSPTLKLLQRDLGTQV
YQKYQIEQYRRNGVLAKMKQLYAKYSEWYITRNPVDDKGVPYNCRQAWQVLAHTYRDGAS
IDMEEAPWPLEMKQNVGKFLYNIIINDVKIDVNMFKPKAKQKKLPGVYKVHRPWGRLVRL
ELKPHPALSRAWAGAALRTLRVRAATAPARAPPRPWARPAAGAYLLTHTPLIRMPMNIMS
QWRRLEEAPPGALYPVLDSLNQLSEVPWVINQPILDLQLQIFRSGGNKKLDIPPPSSALD
ASQFTAGKPQDAAAAFKRRVAMNRARAEMHSLWCDMLYKLSLANHFRDRVFWLPHNMDFR
GRVYACPPHVSALGADSARALLQFARRERLGPGGLRWLKLHAVNLTGTMKKSTVDERLAY
AESIMEKILDSADNPLDGEGWWQQSEEPWQTLACCKEIANAVRSPNAEEYMCGFPVHQDG
SCNGLQHYAALGGDGAGAAAVNLAPAARPGDVYSAVAALVEEMRKRDAAAGVQPAIILEN
FVRRKVIKQTVMTTVYGVTRFGARLQIAKQLKDIDEFPKEHVWSCSQYLTTKTFDSLQEM
FTSTKLIQDWFTDCAKVISGVCGESVEWVTPLGLPVVQPYHRRAAPDAAHAPLDLLQRPC
TMKQRNAFPPNFIHSLDSSHMMLTGLACAAAGLTFVSVHDCFWTHPRNVDRMNKICREQF
VALHSQPILENLSEFLVNRYSYNESEVMDNTAGAANKRRVNALLKQVPSKGNFDLTSVLK
SVYFFS
NT seq 4161 nt   +upstreamnt  +downstreamnt
atgcatcgacttatatctgccaagaacatataccgtaacacctttcacggcctttcttta
ccagggagcaattccctcaataatactccgatttcggaaatacaatgtgcaggttgtcga
aaaattctcctcacaggtaaatcatcagaaaatcttgtgaggcatcaatctacgagaacg
gttagtgtgttgagatcatctagaaaaaagactaaacacaaaaattataaaaagtatggt
gaactcttagaggttggtaattcaatgactgaaactaaggtttcaataagcaagttacat
gcttcacacctttctaaactggcctctagccctgtgtctttaggtcagcttcatcaactt
acaaataaacctcttaaaaaattttcacatcttaaagaagtggatccggaattgctgcag
agtgtcagggataagatcttgaaaaagcctgtttcaactgtttctaaggaagtagtatta
gaagatgacaaatgtgcccttgtttatacaactcatcaattgagtagcgtagaaaggttt
aaaaccaagcaatatataggcatggtgaaggatagttattataattttagaaaagctaca
ctgtatgaccagagattacaagatttaagatatgcaataaatgaaggcttgaaccaggag
tttgatcttcacgagactaagaatgaagatgtcaaaccaaatagtactatggggtcccat
gagttgccaaagagcccacatgcagtgtttagagaactgtttgtagacaaccaattggat
agctatgatcaagagctgttgacacatataaccaatatgcaacgacaaggtatagcccat
ccagctttagaagatctatgtgaagattcaattataaatgaaggggaagctcatgaagac
tttgatcatgtgaatcctgttcctgcaaaaacccttaaaattaaggcagcaagagcagca
cttagaaagaaaaagaaagcgaaacgtgacaaacgcagagcactgcaggaattaaatatg
aaggaagacatgaaggatctcgtgcgccgcgggaaacaggacgcccttcaccaacttctc
actgctcacttgaacctcttatgttcactcaatatggttcatgagggtcgccaaatcctc
cattactaccgacaaaagagttgtaggacaccagacatcgggaaaatatctgatgtcaaa
atatacaacactctcttacatggatatgcattgttgggtcaaatagaaaatgtcaaagaa
cttcttatgaccatgtccgaggatggcattgaaccaaacgcacaaacttacgccgccgtt
tttgagagcatagagaggtgtgaaagagatgacaaactgactttacttaatttttttaac
aaatccatggaagaaaagggtattaatctaaatgacttgatggacaagacaaagtttctc
aatgaccaaagagcagtggtgctgaaggcaataaggcgcattcagccgggattcgaacct
gtgtacacgcctcctgtactagactatgattgcagactgttagatgatctcactctcgac
aaggtggaaggcagactcggtcttctgaaatctcccgcggaaggagtggtcacattggac
gagatccatggtttgggtaaattgcaactcgacacggaaatcaaaggagaaattgaagta
gaaaacattgacgtcaaggatgagtcttcgcctcacgtcaaattctgtagggaaaaatgg
aatgagacagaaagtgaatggcgggtggcgatccgagaggctttcgtgcgaaaccttggc
accttgaagtctcagagtgtggcttctcaatccgccatcacgctgtacccttatctcagg
gtgttagaggtggatcaattcgtagaactgataatgggagagatcaggaagctggtggac
ggcagcgagacctacagccctactctcaagctgttgcagagggacctgggcacgcaagtc
tatcaaaagtatcaaatagagcaataccgtcgtaacggggtcttggccaaaatgaagcaa
ttatacgccaaatacagtgaatggtatataaccagaaatccagtagatgacaaaggcgtg
ccgtacaactgccggcaggcgtggcaggtgctcgcgcatacctacagagatggcgcctct
atcgatatggaagaagcgccgtggcccctagaaatgaagcagaacgtcggtaaattcctg
tacaacatcatcatcaatgatgtgaagatagacgtcaacatgttcaaaccgaaggctaaa
cagaagaagctgccgggcgtgtacaaggtgcaccggccgtggggccggctggtgcggctg
gagctgaagccgcaccccgcgctgagccgcgcgtgggcgggcgcggcgctgcggacgctg
cgcgtgcgcgccgccaccgcgcccgcgcgcgcgccgccgcggccctgggcgcgccccgcc
gcgggggcctatctgctcacacacacgccgctcatcaggatgccaatgaacataatgagt
caatggaggcggctggaagaagcgccgcccggagccctatacccggttctggacagcctc
aaccaactgtccgaagtgccgtgggtcatcaaccagcccatactggatctacagctgcag
atcttcaggtcgggcggcaacaaaaagttagacattccgccgccgtcgtcggctttggac
gcgtcgcagttcaccgcgggcaagccacaggacgccgccgcggcctttaagcgccgcgtg
gcaatgaatcgtgcgcgcgccgaaatgcactcgctgtggtgcgatatgttgtacaaactg
tcgcttgcgaaccatttcagagaccgcgtgttctggctgccgcacaacatggacttccgc
gggcgcgtgtacgcgtgcccgccgcacgtgtcggcgctgggcgcggactccgcgcgggcg
ctgctgcagttcgccaggagggagcggctgggccccggcgggctccggtggctgaagctg
cacgcggtcaacctcaccggcactatgaagaagagcaccgttgatgaaagactcgcatat
gctgaaagtataatggagaagattctagactcggctgataacccgctggacggcgagggc
tggtggcagcagtccgaggagccgtggcagacgctcgcgtgctgcaaggagatcgcgaac
gctgtcagatcgcctaatgccgaagaatacatgtgcggcttccccgtgcaccaggacggg
tcgtgcaacgggctgcagcactacgcggcgctgggcggggacggcgcgggcgccgccgcc
gtcaacctggcgcccgccgcgcgccccggggacgtctacagcgccgtcgccgcgctggta
gaagaaatgcgcaaacgagacgccgctgccggagttcaacccgcgattatattggagaat
ttcgtgcgacgcaaggtgatcaaacagaccgtgatgactacggtatatggcgtcaccagg
ttcggggcccggctacagattgctaaacagctcaaagatatcgatgaattcccgaaggag
cacgtctggtcttgttcccaatacttgaccaccaagaccttcgacagccttcaggagatg
ttcacctccactaaacttatacaagactggttcaccgactgcgccaaagtgatatcggga
gtgtgcggcgagagcgtggagtgggtgacgccgctggggctgcccgtggtgcagccctac
caccgccgcgccgcgcccgacgccgcgcacgcgccgctcgatctgctgcaacggccttgc
acgatgaagcaacgcaacgctttcccgccgaacttcatccactcgctggactcgtcgcac
atgatgctgacggggctggcgtgcgccgccgcggggctcaccttcgtctccgtgcacgac
tgcttctggacgcacccgcgtaatgtcgaccgcatgaacaagatatgccgcgaacaattc
gtcgctctgcactcacagccgatcttagagaacttgtcagaattcctagtgaacagatac
agttataacgaaagcgaggtcatggacaacaccgcgggggcggcgaacaagcggcgggtc
aacgccctcctgaagcaagtgcccagcaaagggaactttgatctcaccagcgtgctcaag
tcagtctacttcttcagttag

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