Amyelois transitella (navel orangeworm): 106134437
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Entry
106134437 CDS
T09957
Name
(RefSeq) septin-interacting protein 1
KO
K13103
tuftelin-interacting protein 11
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atra03041
]
106134437
Spliceosome [BR:
atra03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
106134437
Other components
Complex C specific factors
106134437
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
106134437
NCBI-ProteinID:
XP_060805837
LinkDB
All DBs
Position
20:join(2415257..2415362,2415683..2415826,2416230..2416435,2418223..2418342,2418823..2418992,2420065..2420248,2420771..2420974,2421492..2421709,2422569..2422765,2423941..2424159,2426648..2426811,2429326..2429721)
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AA seq
775 aa
AA seq
DB search
MSDDEVIRFEITDYDLDNEFNPNRSRRAKKEQQIYGVWAKDSDEDDNEDNIRQRTRKPKD
FSAPIGFVAGGVQQAGKKKEEKKELQPSEASTSRPALAADSSDEDEKPTNPAESETAGIR
RVGQGMRPANFGGNMGNWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEATLRKGR
GAIGAYGPEKSTQKAKKEQEKRLKEKEEQEKGMSEKSYNWKKSHKGRYFYRDAADVIQEG
KPSMHTVTTNELSRVPVIDMTGKEKRVLSGYHALRAAAPRFEHEPRRHCRHFTAPALVHN
LQVVVDSCEQDIIQNARELQTAEDEIVVLERDLEEFNVKLKEHDDVIEKVQSILQRVEAL
DKPDLSLEDAYEVLAELKELYPLEYEMFGLGTIAGTIVSPLLSALLAPWDPLTAPDDPVP
VFSKWRKLLTEEAYNSLLWQHLVPHLNTAVEAWNPRSPAPLLRALSRWAGAAPRWLLAAW
SARHVTPRLLAAVRAWDPTRDTVPLHTWLLPWHPHNGESLARSVYPAVRSRLATALSAWH
PADGSARPLLAAWKEAWGSTLTALLHQHIVPKLEHCLQMAPLELVGRENAAWLWCVDWLE
LLGAPTVAAIAARALLPRWLAALAAWLNTNPTHATVLNSYTDFKKMFPEEVLKEPAVRDA
FRKALDMMNRSTDIETVEPPPPPRFTVTETKETSRIADVLASTTSQKSFSELLESRCVEK
GITFVPIAGKNREGRPLYKIGDMQCYVIRNVIMYSEDGRTFSPISIERLLNMVED
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgacgaagtcatacggttcgaaatcaccgattatgatttggacaacgagttc
aatcccaatagaagccgaagagctaagaaagaacagcaaatttatggagtatgggctaag
gatagtgatgaagatgacaatgaggacaatattagacaaaggactcgaaagcccaaggac
ttctcagcgccaatcggatttgttgctggcggagttcagcaggcaggaaaaaagaaggaa
gagaaaaaagaactgcaaccgtctgaagcctccacatccagaccggccttagctgctgac
agctctgatgaagacgagaaaccgaccaaccctgcggagagcgagacagcagggatccgg
agagtgggtcagggcatgaggccggcaaactttggagggaacatgggcaattgggaaaaa
catactaagggtattggagccaagttgctgctacagatgggttaccaaccaggcaagggt
ctcggcaaagacctccaaggtatatcggcaccagtagaagctactctcagaaaggggaga
ggagctatcggtgcttatggaccagaaaaatctacacaaaaggcgaagaaagaacaagag
aaacgtttaaaagagaaggaggaacaagagaagggcatgtcagagaagtcatacaactgg
aagaagtcgcacaaaggccggtacttctacagggacgctgctgacgtcatacaagaaggg
aagccttctatgcatacggttactacaaatgaactgtcccgcgtgcccgtgatagacatg
acgggcaaggagaagcgcgtgctgagcggctatcacgcgctgcgcgccgccgcgccgcgc
ttcgagcacgagccgcgccgccactgccgccacttcactgcgccggcgctcgttcacaac
ttgcaggtggtcgtcgattcttgtgaacaggacataatccaaaacgccagggaacttcaa
acggcagaagacgaaatcgttgtattggaaagagatttggaagagttcaatgtgaaattg
aaggagcatgatgacgtcatagagaaagtgcagtcaatattgcaaagagtcgaggcgctt
gataagcctgatctatctttagaggacgcatatgaagtattggctgaattgaaggaatta
taccccctcgaatatgaaatgtttggtctgggcactatagcgggtacaatagtcagtcca
ctgctgagcgcattacttgccccgtgggacccgctcaccgcgcccgacgacccagtgcca
gtgtttagtaaatggcgcaagttgctgacagaagaagcgtataacagtttgctgtggcaa
catttagtgcctcatcttaatacagccgtagaagcgtggaacccccgctcgccggcgccg
ctgctgcgcgcgctgtcgcgctgggcgggcgcggcgccgcgctggctgctggcggcgtgg
agcgcccgccacgtcacgccgcgcctgctggccgccgtgcgcgcctgggaccccacccgc
gacaccgtgccgctgcacacgtggctgctgccgtggcatccgcacaatggtgaatccctg
gcccggagcgtgtaccctgcggttcgaagccgcctcgccactgctctgtccgcgtggcac
cccgccgacggctccgctaggcctttgctggcggcctggaaggaggcctggggctccaca
ctgacggccttgctgcaccagcatatagtgcccaaactggagcattgtttgcaaatggcg
cctttggagctggtgggaagggaaaatgccgcgtggctgtggtgcgtggactggctggag
ctgctgggcgcgcccacggtggcggccatagctgcgcgcgcgctgctgcccaggtggctg
gcggcgctggccgcgtggctcaacaccaatcccacgcacgcgactgtgctcaactcctat
acggactttaagaaaatgttcccggaagaagtgctaaaagagccggcggttcgggacgcg
ttcaggaaagccctagacatgatgaacaggagcacagacatcgagacagtagaaccgccg
cctccgccgcgattcaccgtcacggagactaaagaaacatctagaatcgcggatgtacta
gcttctacgacgtcacagaagagtttctcagaactgttggagtctagatgtgttgaaaag
gggataacgtttgtcccgatagcgggcaagaacagggaaggcaggccgttgtacaaaatt
ggtgatatgcagtgttacgttataaggaatgtgattatgtattccgaagacggtaggact
tttagcccgatcagtattgagaggttgttgaacatggtcgaagattga
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