Amyelois transitella (navel orangeworm): 106134494
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Entry
106134494 CDS
T09957
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106134494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atra03041
]
106134494
Spliceosome [BR:
atra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106134494
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Erf4
Motif
Other DBs
NCBI-GeneID:
106134494
NCBI-ProteinID:
XP_013190012
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All DBs
Position
5:complement(join(9664697..9664807,9665482..9665706,9666060..9666209,9666517..9666657,9666949..9667133,9667442..9667584,9667919..9668123,9668426..9668561,9668882..9669085))
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AA seq
499 aa
AA seq
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MSLADELLADLEENDDGELEAAIESKTSTNEASHEFAVPYPVIPKEEEIKNVSIRELAKL
RDSDRLKRVITEIEQNVGNNRNKIEVTGLMESDPEYQLIVEANNIAVEIDGEIAIIHRFV
RDKYQKRFPELDSLIVTPLEYIRSVKELGNDLDQAKNNEILQSFLTQATIMIVSVTASTT
QGKRLSEKELQEIYEACDMAAELNNYKSKIYEYVESRMTFIAPNITAIVGASTAAKILGV
AGGLSKLSKMPACNVLPLGQQKKTLSGFSQAAALPHTGFIYFSQIVQDTPPELRYKAAKL
VSTKLTLAARVDASHSSTDGHIGRQLREGIEKKLDKLQEPPPVKFVKPLPKPIEQSRKKR
GGKRVRKMKERYAMTEFRKNANRLNFADIEDDAYQEDLGYTRGTIGKSSTGRVRLPQIDE
KTKVRISKTLQKNLQKQQQYGGATSIRRQVSGTASSVAFTPLQGLEIVNPQAAETRVNEA
NAKYFSNTSGFLSVGKKTT
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggcagacgaattattagcggatttagaagaaaatgatgatggtgaacttgaa
gccgcaatcgagagtaaaacttcaacaaatgaagcgtctcacgaatttgctgttccttat
ccagttatacccaaagaggaagaaataaaaaatgtttccattagagaattagcgaagtta
agagattctgatcggctgaaaagagtaataacagaaattgaacaaaatgttggtaacaat
cgaaataaaattgaagtgacaggtttaatggaatctgatcctgaataccagttgattgtt
gaagccaacaacatagctgtggagattgatggtgaaattgctattattcacagatttgta
cgtgataaatatcaaaaacgttttccggagctagattcgttgattgttactccgttggaa
tacattcggagtgtgaaggaacttggaaatgatctggaccaggctaaaaataatgaaatc
cttcagagtttccttacacaagctactatcatgatagtatccgtaacagcatctacaaca
caaggaaaacggttgagtgaaaaagagttgcaagaaatatacgaagcatgtgacatggct
gccgagctgaacaactacaagtcaaaaatatatgaatatgttgaaagtagaatgacattc
attgcaccaaatattacagctatagtcggtgcgtccacagcagcaaaaatcctgggtgtg
gctgggggtctttctaaactatccaaaatgcctgcttgcaatgtccttccccttggacaa
caaaagaaaaccctgtcaggattctcccaggcggcagccttgccacacactggctttatt
tatttctcgcaaattgtacaagatacgccccctgagctgaggtacaaagcagccaagcta
gtatcaactaaactgacgctcgctgcccgcgtggacgcctctcactcgagcacggacggc
catattggaagacagctgcgggaaggcattgagaagaaactggacaaattacaggaaccc
cctccggtgaagttcgtaaaaccactcccgaagccgattgagcagagtcgcaagaagcgc
ggcggcaagcgcgtgcgcaagatgaaggaacgctacgccatgacagagtttagaaagaac
gcgaacaggcttaacttcgctgacatcgaagatgacgcataccaagaagacctgggctat
actcgcggtactattggcaaatccagcacaggccgtgtgaggttgccacaaatcgatgag
aagacgaaagtgcgcatcagcaagaccttgcagaagaatctgcagaagcaacagcagtat
gggggcgctactagtataaggagacaggtgtccggcacggcgtcttctgtggccttcact
ccgttacagggtttggaaatagtaaatccccaagcggcagaaactcgcgtcaatgaagct
aatgccaaatatttctccaacacctccggttttctctcagtggggaagaagaccacttaa
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