Amyelois transitella (navel orangeworm): 106134511
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Entry
106134511 CDS
T09957
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
106134511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atra04131
]
106134511
Membrane trafficking [BR:
atra04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
106134511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
DUF6987
APG6_N
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
106134511
NCBI-ProteinID:
XP_013190047
LinkDB
All DBs
Position
17:complement(join(1011268..1011417,1012345..1012550,1013341..1013461,1013759..1013817,1014476..1014569))
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AA seq
209 aa
AA seq
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MATLVQSYEQQYSVLTADITAKIGRLKAGHEENRDQLSREIQANFEEANDLLEQLELESR
GAGASSRLAAYRAELQRVREEYRSVVNNSSSYNIETDEVYDDWGGSDQRTKLLDNTERLE
RTGKNLTEGYRVILETEQIGAAVLQDLNIQRETIQRSRGRLRETDEQLNRSSRLMSSMIV
RSLQDRLVLVMVFLLLGAMLCLGLYFYVT
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggctacattagtgcaatcttatgaacagcaatattctgtgctcacggcagatatcact
gctaaaattggccgcttgaaggcaggtcacgaagagaatcgtgatcagctgtccagagag
atccaggctaatttcgaggaagcaaatgacctgctggaacaattggaattggagtcgcgg
ggcgccggcgcgagctcccggctggccgcctacagagctgaactgcaaagggtcagagaa
gaatatcgctctgtcgtcaacaactcttcttcatataacatagaaactgacgaggtgtac
gacgactgggggggcagcgaccagcgcaccaaactcctggacaacacggaacgcctcgag
aggactggcaagaacttaaccgaaggctaccgagttatattggagacggagcagattgga
gctgcggtgctgcaagatcttaatatacagagggagactatacagaggtcgagaggacgg
ctacgtgaaacagacgagcaactgaaccggtcttcccgcctcatgagctccatgatagtg
aggtccctccaggaccggctcgtgctcgtcatggtgttcctgctgctgggtgctatgctc
tgtttaggcctctacttctacgtcacatag
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