Amyelois transitella (navel orangeworm): 106134646
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Entry
106134646 CDS
T09957
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atra03009
]
106134646
Enzymes [BR:
atra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106134646
Ribosome biogenesis [BR:
atra03009
]
Eukaryotic type
Pre-60S particles
Helicases
106134646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Spore-coat_CotD
Motif
Other DBs
NCBI-GeneID:
106134646
NCBI-ProteinID:
XP_013190195
LinkDB
All DBs
Position
9:join(2973134..2973334,2973456..2973635,2976151..2976334,2976686..2976835,2977047..2977243,2979430..2979640,2980496..2980728,2981460..2981651,2982517..2982630,2983144..2983262,2984168..2984303,2984723..2984876,2985172..2985356)
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AA seq
751 aa
AA seq
DB search
MLKSKDLGDDLPGFEVPSEEKPADNELQSGKKKKKGSGGFQSMGFSFPVLKGITKRGYKQ
PTPIQRKTIPLALEGKDVVAMARTGSGKTACFVLPILEKLTSPASKPMPGKNFRALILSP
TRELALQTLKFVRELGKFTGLSSAAILGGESIEQQFSVMSGTAPDIVVATPGRFLHICIE
MSLKLDNINTIVFDEADRLFELGFGEQLREIVARLPSSRQTLLFSATLPKMLVEFARAGL
SDPMLIRLDVDWKLPSTLWLGWISVRAELKTAALLFLLDKVLTAHTPQAVVFAATKHHVE
YLHLILQKAGITSTYAYSGLDSSARKIALGRFTNKKCSVLIVTDVAARGLDLPALDTVIN
YNFPATPKLFVHRVGRSARAGRAGRAFSLISADDVAHLLDLQLFLGTELKSPTQSAGAGA
ACESGVYGSVPTAALEMRHQDVVAWEKDYSEVEEAARTCARGWQQYVKWREPASAAANQR
AKLSAAPARAHPFLLDGADQAADDLVEKIKNYTPKGTILELSAKNDSPQYIAMKAKKKLH
GKMVQKTRENKKLMAEGILVENVMDTNKKSKKKEVVRDENYIPHQASDQHTEAGMAVNFN
AGAAAAELGVAADCGAAARAQRGLQRWDRKRKKMVHVDPDGGRKMIRTESGGRVPASYRS
GRYQDWKKRNAAVDNGDDEDDRPDPGRKKPVSEFRPHWVKHNERVAKKKAEASSNEFKNK
QQIVKERLRKDKLKQRLKFKSKSKNNKKKRK
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtctaaagatttaggagatgacctccctgggtttgaggttccttccgaagaa
aaaccggccgacaatgagttacagagtgggaaaaagaagaaaaaaggatctgggggtttc
caatccatgggtttcagttttcctgtgctgaaaggtataactaaaagaggatataaacag
ccgacgcctattcaaagaaagacaatcccactagcattggaaggtaaagatgttgttgcc
atggctcgcactggctcgggtaaaactgcctgcttcgtgttacccattttggaaaaactc
acatcaccagccagcaagcccatgccagggaaaaacttcagggcacttattttgtctccc
acaagagaattagcactccagactttaaagtttgtaagagaactgggtaaattcaccggt
ctatcatcagcagcgatcctcggaggagaatccattgagcagcaattcagtgtgatgtct
ggaactgctccggatatagtggttgcgactcccggaagattcttacacatttgcatcgaa
atgagcctcaaattggataatattaatacaatagtatttgatgaagctgaccgcctgttt
gaactcggttttggggaacagctgagggaaatagtggccagattgccgtctagtcgccag
acgttattgttctctgctacattacccaagatgctggtagaattcgccagggcaggtctc
tcagaccccatgctgatccgcctagacgttgactggaagcttccatccacgttgtggctc
ggctggatatcagtgagagctgagttgaagacggcagctctcctgtttctgctggacaaa
gtgctgactgcgcacacgccgcaggcggtcgtcttcgcggcaactaaacatcacgtcgaa
tacttgcatttaatactacaaaaggccggtataacatcaacctacgcgtactcaggtcta
gactcgtcagcccgcaagatagccctcggtcgcttcaccaacaagaagtgttcagttctt
atagttaccgatgtggccgctagaggattagatctgccagctttggacacggtcataaat
tacaacttcccggccacgccaaagctgtttgtccatagagttggtcgtagtgccagagca
ggtcgcgccgggcgggcgttctccttaatctccgccgacgacgtcgcccacctgctcgac
ctgcaactattcctgggcacagagctcaagagcccgacgcaatcggctggcgcgggggcg
gcgtgcgagtcgggcgtgtatggctctgtgcccaccgccgcgctggagatgaggcatcag
gacgtcgtcgcttgggagaaggattattctgaagttgaagaagcggcccgcacgtgcgcc
cgcggctggcagcagtacgtcaagtggcgcgagccggcgtccgcggcggccaaccagcgc
gccaagctcagcgccgcacctgcgcgggcgcaccccttcctgctggacggcgcagatcaa
gccgctgatgatttggtggaaaagattaagaattatacacctaaagggacaatattggag
ctctccgctaagaatgattcgccacaatacatagcgatgaaagccaagaagaaacttcac
ggaaagatggtgcagaaaactagagagaataagaaattgatggctgaaggaatattggta
gaaaatgttatggatactaataagaaatcaaagaagaaagaagtggtgagagacgaaaat
tacatcccgcatcaggcgagcgatcaacacactgaagctggtatggcggtgaacttcaac
gcgggcgcggcggcggcggagctgggcgtggcggccgactgcggcgcggcggcgcgcgcg
cagcgcggcctgcagcgctgggaccgcaagcggaagaagatggtgcacgtcgacccggac
ggtggtcgcaagatgattcgcactgaaagcggtgggcgagtgccggccagttaccgcagc
ggccgctaccaagattggaagaaacggaacgcggctgtcgacaacggtgacgatgaagat
gatcgacctgaccctggcaggaagaaaccagtatcggaattccgtccacactgggtaaag
cacaacgagcgagtggccaaaaagaaggcagaggcgtcatcgaacgagttcaagaacaaa
caacagatcgtgaaggagcgcctgcgcaaggataaactcaagcaacggctcaagttcaaa
tctaaatctaagaataataagaagaagagaaagtga
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