Amyelois transitella (navel orangeworm): 106134674
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Entry
106134674 CDS
T09957
Name
(RefSeq) RNA-binding protein lark isoform X1
KO
K13187
RNA-binding protein 4
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atra03041
]
106134674
Spliceosome [BR:
atra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106134674
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GFIT
Motif
Pfam:
RRM_1
RRM_5
zf-CCHC
RRM_occluded
zf-CCHC_5
zf-CCHC_3
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
106134674
NCBI-ProteinID:
XP_013190238
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All DBs
Position
17:join(899068..899733,900006..900277,900713..900754,901281..901329)
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AA seq
342 aa
AA seq
DB search
MPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL
NGEMVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRN
YGFVHLDATGDVNEAIKELNGMVVDGQPMKVQISTSRVRQRPGMGDPEQCYRCGRGGHWS
KECPKAMGPDRNGFRDRAFGRDPYPPPPPPPFLRDRMMGGFGDPYDGYYDRARFDSPREM
FERRYPVGGSRGLDMGASRGARGDFASPPLRREPMPPMPSLPPMRSSMGAMRSSYDAMFS
RRSPPRGPQMSRGMYEDFSRDTFDDRRPGMRGPSPSRRYAPY
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcgccggtactttcaaaatcttcgtcgggaatctttccgataaaacgacggac
gccgatcttagaccgctgttcgaaaaatacggtacagtcgtagaatgcgatattgtgaga
aattacggtttcgtccacatggaaaatgaacaagtcggtcgcgaagcaattcagaactta
aacggagagatggttcatggtcaagctattaaaatagaagctgcgaagagtagaaaggcg
ccgtcgacgccgaccacaaaaatattcgtcggtaacctcacagacaagacgcgcgcgccc
gaagtccgcgagctatttcagaagtatggcacggtcgtcgaatgcgatattgttcgtaac
tatggattcgtgcatctggacgcgacgggtgacgtgaacgaagctatcaaagagctgaac
ggtatggtggtggacgggcagcccatgaaggtgcagatctctacgagccgtgtccggcag
cggccgggcatgggcgaccccgagcagtgctaccgctgcggtcgcggtggacactggtcc
aaggagtgccccaaggcgatgggccccgaccgaaacggtttccgcgatcgggcgttcggc
cgcgacccctaccccccgccgccgccgccgccgtttctccgcgatcgcatgatgggagga
tttggggatccttatgatggatactacgaccgtgcccgtttcgactctccccgtgagatg
tttgagcgccgttacccagtgggtggatcccgggggctagacatgggcgcgtcccgaggc
gctcgcggggacttcgcgtcgccgccgctgcgccgcgagccgatgccgccgatgccgagc
ctgcctcccatgcgcagcagtatgggcgccatgaggtcgtcgtatgatgctatgttcagc
cgccggagccccccgcgcggacctcagatgtcccgcggcatgtacgaagacttcagccgt
gatacatttgatgacagaaggcctgggatgcgcggaccgtcgccgtctcgaagatacgct
ccgtactaa
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