KEGG   Amyelois transitella (navel orangeworm): 106134759
Entry
106134759         CDS       T09957                                 
Name
(RefSeq) glutamate-gated chloride channel subunit beta
  KO
K05195  glycine receptor alpha-3
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra04080  Neuroactive ligand-receptor interaction
atra04082  Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:atra00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    106134759
   04082 Neuroactive ligand signaling
    106134759
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:atra04040]
    106134759
Ion channels [BR:atra04040]
 Ligand-gated channels
  Glycine
   106134759
SSDB
Motif
Pfam: Neur_chan_LBD Neur_chan_memb C1_2
Other DBs
NCBI-GeneID: 106134759
NCBI-ProteinID: XP_060801732
LinkDB
Position
9:join(4912875..4912954,4914206..4914294,4914420..4914515,4915283..4915347,4915463..4915615,4916052..4916202,4916580..4916720,4917230..4917304,4917845..4917997,4918217..4918369,4918703..4918917,4920422..4920472,4921308..4921376,4921953..4922063,4922412..4922558)
AA seq 582 aa
MGWSCVVARAVAFLLTLSMVSALTSDIFAAGKSDKEILDNLLKNSRYDKRLLPPVDDPEF
CCGLTSPNDSLAQNKVGFSSLRPRSHNRGVLTVNVSVLLLSLASPDESSLKYEVEFLLQQ
QWYDPRLRYSNQSHYDFLNAIHHHEDIWLPDTYFIMHGDFKDPIIPMHFALRIYRNGTIN
YLMRRHLILSCQGRLNIFPFDDPLCSFALESISYEQSAITYVWKNDEDTLRKSPSLTTLN
AYLIQNQTIPCPIKASWRADGISLYEDDEELTCNLCQRRFEEQGNYSCLKVDLIFTRDRA
FYFTTVFIPGIILVTSSFITFWLEWNAVPARSMIGNYSCLKVDLIFTRDRSFYFTTVFIP
GIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSNLTAMNVWDGVC
MCFIYASLLEFVCVNYVGRKRPLHNVVYRPGENPVTQRLPAVLSRIGIILASPLEAIAFL
QWARSDTPEDEPSVSGAGDKKRESTGAADLVTCTACSGAPGPCTHTANNGGVSEPCFVQV
RKKEPPHPIRVAKTIDVIARITFPTAYAVFLIFFFIHYKAFS
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgggttggtcatgcgtggtggcacgcgcagtggcctttttacttacgttgagcatggtt
tcagctctcacatccgacatatttgctgcgggaaagtcggacaaagagatactggacaac
ctactcaagaattcccgctacgataaaagactgcttccacctgtagatgatccagaattc
tgttgtggtcttacgtcgcccaacgactctctggctcaaaataaagtcggattctcttcg
ctccggcctcgctcgcacaatcgcggtgtcctcaccgtaaatgttagcgtgctacttctt
agtttagcatctccagacgaatctagtcttaaatacgaagtggagtttttactacagcag
cagtggtacgacccgcgacttcgttattccaatcagtcgcactacgacttccttaacgcc
attcatcaccacgaagacatttggctgccagacacatatttcattatgcacggggatttt
aaggatccgataatccctatgcacttcgcgctgcgtatatatcgcaacggcaccatcaac
tatctgatgcggcgccacctaatcctctcctgccaaggaagactcaacattttccctttt
gacgacccattgtgttcatttgccttagaaagtatatcatatgagcagtcagcgattact
tacgtgtggaaaaacgacgaggacactctacggaaatcgccctcgctcaccaccctcaac
gcgtacctcatacagaaccaaaccatcccctgccccataaaggctagttggagagctgat
ggtatatcactttacgaagacgatgaagagctgacatgtaacctttgccagagacgcttt
gaggagcaaggtaactacagctgccttaaggtcgacctaatatttactagagaccgagcg
ttctactttactacagtatttatccctggaataattctggtgacctcctccttcatcaca
ttctggctggaatggaatgcagtgccagcccgttccatgataggtaattacagctgtctc
aaagtggatctcatcttcacgcgggatagatctttttacttcaccacagttttcattccg
ggcatcattttggtgacatcatcgtttattactttttggctggaatggaatgcagtgcct
gctagagtaatgataggtgtaacaacgatgttgaactttttcacaacgtcaaatggtttc
cggtcgaccctgccggtggtgtccaatctcacggctatgaacgtgtgggacggagtctgc
atgtgttttatctacgcatctcttctagaattcgtatgtgtcaattacgtcggaagaaaa
agaccactacacaatgttgtgtaccgccccggagaaaaccccgtcacacagcgactgccc
gcagtcctcagcagaattggcattatactggccagccccctggaggcgatcgcattccta
caatgggctaggtctgacactcccgaagacgagccaagtgtaagcggcgccggtgacaaa
aagcgggagtcaacgggtgcagcagacctagtgacatgtactgcttgcagcggggcccct
ggcccttgcactcacacagccaacaatggaggcgtatcagaaccatgtttcgtccaggtt
cgcaaaaaagaacccccgcacccgatccgagtggccaagaccatcgatgtcatcgccagg
atcacctttcccactgcctatgccgtgtttcttatattcttcttcatacactacaaggcg
ttttcttaa

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