Amyelois transitella (navel orangeworm): 106134965
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Entry
106134965 CDS
T09957
Name
(RefSeq) RNA exonuclease 5
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106134965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atra03009
]
106134965
Ribosome biogenesis [BR:
atra03009
]
Eukaryotic type
Pre-60S particles
RNases
106134965
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
V-ATPase_H_C
Motif
Other DBs
NCBI-GeneID:
106134965
NCBI-ProteinID:
XP_013190574
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All DBs
Position
11:join(5273243..5273285,5273523..5275210)
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AA seq
576 aa
AA seq
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MEEPKSKKRRVDDVGQNKLGFSKDKNKINKKQEHYHEKQKKHIPKFRLKTAGECASILTS
PNDRVPLLLTDIQHLLLHSLLGNLNLSQPPRWYVLDKCDHICQTTCLILEGISVLHWEKY
SEKFVNVHNIFDNFVEILTPSIYNGSLVQELALVPLSEVDKEDIIQKYGSMNLALEARKD
LMVMMKAVFPIEDNNAPIVYDMLQDKFPRTQLILSAWQLIEENYPMPLKGKLKNAYSDYV
MTKDVYEPVTAKSPLFGLDCEMCMTSAGSELTRVSIVNEKHETIYESFVKPYNDITDYLT
RYSGITKCLLNDVTKRLEDVQNDIRDLLPADAILVGQSLNLDLHALKMMHPYVIDTSLIY
NFTGERTRKPKLKALAREFLKEDIQNGKKGHCSVEDSLAALKLVQLKLSQSIEFGDAVHT
NRQKYKENAFKITKTKDIALSIFNHMIEQNKTSLVIGCDNITGDYHTYLTRARESIITHL
KKSKQKKVKLNTMDDVEQVVDALSKATKEYNFSMAHLKLDFDSQSELEQMQQVDVIVRWI
AKIWNCLKQSAVFVVVLGGTASDNGVAMVKVKSSMS
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacctaaaagtaaaaagcgccgggttgatgatgttggtcagaataaattagga
ttttcaaaagacaaaaacaagataaataaaaaacaagaacactatcatgaaaaacaaaaa
aagcatatcccaaagtttcgtttaaaaacagctggagaatgtgcttcaattttaacatcg
ccaaatgatcgtgtccctctcctgttaactgacattcaacatcttctattgcactcattg
ctgggaaatttaaacttgtcacagccacctcgttggtatgtgttggataaatgtgatcat
atttgtcaaacaacatgcctcattttagaaggtatttccgtgttacactgggaaaaatat
tcagagaaatttgtcaatgtgcataatatttttgataatttcgtggaaattctaaccccc
tctatttataatggatctcttgtacaagagttggctcttgtccctttatctgaggtagat
aaagaggacatcatacaaaaatatggaagtatgaacttggctttagaagcaagaaaagat
ctgatggtgatgatgaaagcagtgtttccaattgaagataataatgcaccaattgtatat
gatatgttacaagataagtttcctagaactcaattaatactttctgcttggcaacttatt
gaagaaaactacccaatgccattaaaaggtaaattgaaaaatgcctattcagactatgtt
atgacaaaagatgtgtatgaaccagtgacagcaaagtctcctctgtttggattggactgt
gagatgtgcatgactagtgcagggtcagaactgactagagtgtctatagtcaatgagaaa
catgaaactatttatgagtcatttgtgaaaccttataatgatataacagattatctcaca
cgctactcaggcatcacaaaatgtttacttaatgatgttacaaaaagattagaagatgta
caaaatgatatacgagacctccttcctgctgatgcaattttagttggccagtctttgaat
ttagatctccatgctttgaaaatgatgcatccttatgttatagatactagtttaatatat
aattttactggagagagaacccgtaaaccaaaactaaaggcattggcaagagaatttcta
aaagaggatatacagaatggaaaaaaaggacactgttcagttgaagattctttggctgca
ttgaagttggttcagctaaaacttagtcaaagtatagaatttggagatgctgtacacacc
aacaggcagaaatacaaagagaatgctttcaaaattaccaagactaaagatatcgctttg
tccatatttaaccatatgatagagcaaaataaaacatctttagtaattggatgtgataat
ataacaggtgattatcatacttatttaactagggcaagggaaagtattattacacatctg
aagaaaagcaaacagaagaaggtaaaattgaataccatggatgatgttgaacaagttgtt
gatgctctgtcaaaagctactaaagaatataatttttctatggcacatctgaaattagat
tttgacagtcaatcggaattagagcaaatgcaacaagttgatgttattgttagatggata
gctaaaatctggaattgtctgaagcagagtgctgtgtttgttgtagtgcttggtggcact
gccagtgataatggagttgctatggtaaaagtaaaaagtagtatgtcatag
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