Amyelois transitella (navel orangeworm): 106135050
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Entry
106135050 CDS
T09957
Name
(RefSeq) glutamate-rich WD repeat-containing protein 1
KO
K14848
ribosome assembly protein RRB1
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atra03009
]
106135050
Ribosome biogenesis [BR:
atra03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106135050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EIPR1
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
MIOS_WD40
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_DCAF12
DUF4611
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_SPT8
Saw1
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
106135050
NCBI-ProteinID:
XP_013190678
LinkDB
All DBs
Position
11:complement(join(6943913..6944050,6944296..6944513,6950836..6950990,6951118..6951254,6951562..6951780,6952226..6952388,6952929..6953347))
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AA seq
482 aa
AA seq
DB search
MSKSIKEINPTCCWRTCELRSEQISFIRYQILQKTQNMSNEIEDQMDASDSGSEEDDMDE
EGSAAEDETPQTYLPGQPLKEDEQLVCDQSAYVMLHHAQTGAPCLSFDIIMDNLGSDRDQ
FPMTAYLVAGTQASSAHLNNLLVIKMSNLHPTLKSDDDEESDEDDDEEEEEDEEKKPRMT
FSFIKHQGCVNRIRTANFKNSVLAASWSELGIVDIWNVTQQLQAVDDPVLLERYNLDVVT
NPVKPLYSFNGHQQEGFGIDWCPTEPGVLATGDCRRDIHIWKPNQAGSWDVDQRPLVGHT
NSVEDIQWSPNERNVLATCSVDKTIRIWDTRAAPHKACMLTAENAHESDVNVISWNSKEP
FIASGGDDGFLHIWDLRQFTNSTPVGTFKHHTAPLTSVEWHWTEPSVLASAGEDHQVALW
DLAVERDDDEVVDEELKDLPPQLLFIHQGQSDIKELHWHKQMPGVIVTTAHTGFNIFKTI
SV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagtcaatcaaagagatcaaccccacgtgttgttggcgaacttgtgagctgcgc
tccgagcaaatctcttttattcgttatcaaattctgcagaaaacccaaaatatgtcgaat
gaaattgaagaccagatggatgctagtgatagtggcagtgaagaagatgatatggatgaa
gaaggtagtgcggcagaagacgaaacaccgcagacttatttacccggtcagcccctgaaa
gaggatgagcagctagtttgtgatcagtcagcatatgtgatgctccaccacgcccaaact
ggggctccatgcctcagcttcgacatcataatggataatcttggtagtgacagagatcag
ttccccatgactgcctatttagtcgccggtactcaagcatctagtgctcatttaaacaat
ttgttggttataaaaatgtcaaatctacacccaacattaaaatctgatgatgatgaagaa
tcagatgaggatgatgatgaagaagaagaggaagatgaggaaaagaagccccggatgaca
ttttcatttattaaacatcaaggttgtgtaaataggataagaacagcaaatttcaaaaat
tcagtgcttgcagcaagttggtcagaactaggcatagtggatatttggaatgtgacccag
caattgcaagcggttgatgatccagtccttctagagaggtataacttggatgtggtgacg
aatcctgtcaagcctttatattctttcaatggccaccaacaggagggatttggtattgac
tggtgccctacagaacctggggtccttgcaacaggtgactgtagaagagatatacacatt
tggaagccaaatcaagctggcagctgggatgtggatcagagacctcttgttggtcacacc
aactctgtagaagatattcaatggtcgccaaatgaacgtaatgtgctggcaacatgttct
gtagacaaaacaattaggatatgggacacccgggctgccccccataaagcatgtatgctt
acagcagaaaatgctcacgaaagtgatgtaaatgttatatcatggaatagtaaagaacct
tttatagccagcggtggtgatgatggctttctacatatatgggacttgaggcaatttaca
aatagtacaccagtgggcacgttcaaacatcacacagcacctcttacgtctgtggagtgg
cactggacagagcccagcgtgttggcttctgcgggagaagaccaccaagtagcattgtgg
gatttggcagtagaaagagacgatgacgaggttgtggatgaagaattgaaggacttgcct
ccacaactccttttcatccatcaaggacaaagcgacattaaagaactccactggcacaag
cagatgccgggcgtaatagtgaccactgcacacacaggattcaatatttttaagactatc
agtgtatag
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integrated database retrieval system
