Amyelois transitella (navel orangeworm): 106135068
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Entry
106135068 CDS
T09957
Name
(RefSeq) bromodomain-containing protein 4 isoform X1
KO
K11841
ubiquitin carboxyl-terminal hydrolase 10 [EC:
3.4.19.12
]
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atra01002
]
106135068
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atra04121
]
106135068
Enzymes [BR:
atra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106135068
Peptidases and inhibitors [BR:
atra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106135068
Ubiquitin system [BR:
atra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106135068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
106135068
NCBI-ProteinID:
XP_060802586
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All DBs
Position
11:join(3398073..3398090,3400237..3400366,3400973..3403009,3403160..3403355,3403686..3403911,3406233..3406340,3407022..3407189,3407573..3407780,3408183..3408321,3408748..3408880)
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AA seq
1120 aa
AA seq
DB search
MDLMETEYEFLDLSDVKEAERSSLQCALFKRRTDTSAYTARVGWTEPSVDLSSCSSSTAG
APTASSSLDSLSGGECEMAPHSPARAGAGPPPPPYAAPPHYPPQPHQWPVAPPNVYVSQV
TANVNVHGYMGQYYQPPQPQYAPPPVERAARPHRRDRRNKRAPSPPPQPTPYYVQYPQYY
PAAQAQGAPLYHLPMYQPVVYGPYAHPPYYYPEYPMQVEGDTGDKGPEEYPQEVVMEQET
VDAYYAGAHYTYGPPVEGGMEYMPPIYLPPPTHPPPLPIQQPPPHQTTPHQFNVHAKNFV
QGQNHKTYTPPENKTQEQKPPIAIASASASTATVEALPIKDLKITSKGPSSPKQSDRPVD
TNQAKPATPTEKLSPAPKPEATKLAWVPNENKVPEPAVNTPTQQAKTFPPTASANTIAAA
AAKVQPTLSKPTKGPAPPFTGGKQPPKPSVPQTVVPVQQAVSTPKAPFGNRQKRESGPAN
RSPSNETPESERVAIATEHVKREPPLPPSKAPMPISITLHSQGQPLIVTNKSPFGHSRKA
AVAPEPAPVPQPPPPAPTASDFPPPPTPRNRGEPVPPPVVQPQPQPAPGKSWASLFSSKT
SITTAAPVSAPATEEPSSPTTTTPIAAPNVQKPVAKVPPFDASPLQATVVEKPSPPLRPP
TTTAAPTISYSEKTSVNAVSNVAAPVPAKTPPSNQSPAETREGQKEVTPALPLPPSPFSD
DPNSYRMGEFLLKYQLDNRSVSLLPRGLTNRSNYCYVNSILQALVACPPFYNMLKALPYQ
MRRGKSSTPVIDSLVELCYSFSAAAPARARARAEGASPPPVPGAPPLEGGAGLRVLRALR
PLASHEGRQEDAEEFLGCLLNSLNDEMLELIKLVEPEEPKDGAGQPNGVIPQEQPEEDDD
DDEWKVMGPRNRGAVERRWSARRTPVADIFRGRTRVRLHRAGHHDVTDAVQPFFTLQLDI
ERASSVKDALELLANKDTLEGVSDAWQQLSLEQLPVILLLHLKCFQLDPEGHTAKIVKNI
DFSIDLKIDPKIMSSKVKYTSKQRQYKLFAVVYHEGVEAVKGHYVTDTYHGQVGWIRYDD
STVTQVGESQVLKPKPPRMPYLLMYRRQDTLPIPHRPKPE
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggatttgatggaaacggaatatgagttcctagacttgtcagatgtgaaagaagcggaa
cggagtagtctgcagtgcgcactgttcaagcggaggactgacacgtcggcgtacactgcc
cgtgttggttggactgaaccttctgtagatttatcatcgtgttcatcgagcacggccggc
gcgccgaccgcgtctagcagcctggacagcctatcgggcggcgagtgcgagatggcgcca
cactcgccggcgcgggcgggggccgggcctcctcccccgccctacgccgcgccgccgcac
tacccgccgcagcctcaccagtggcccgtggcaccgcccaacgtctacgtcagccaggtc
accgccaacgtcaacgtgcatggctacatggggcagtactaccaacctccacagccgcag
tacgccccgccgcccgtagaacgcgctgcgcgaccccacaggcgagaccgcaggaacaaa
cgcgctccctcccctccaccgcaaccgaccccatactatgtgcaatacccgcagtactat
cccgcagcgcaggcgcaaggggctccactctaccatctacccatgtaccaaccagtagtg
tacggaccgtatgcgcatcctccttactattaccccgagtaccccatgcaagtggaaggc
gacacgggcgacaaaggaccagaggaatatccccaagaggtggtgatggaacaggaaact
gttgatgcctactacgcaggcgcacactacacatatggcccgccggtcgagggcgggatg
gagtacatgccgccgatatacttgccgccgccgacacatccgccacctttaccgatacaa
cagccaccgcctcaccaaactacaccgcatcaattcaatgttcacgccaaaaacttcgtt
caagggcagaaccataaaacttacacacctccagagaataagactcaagaacagaaacct
cctattgcgatagcctcggcatccgcttcgacggctactgtggaagcattgccgatcaaa
gaccttaaaatcaccagtaaagggcccagcagccctaaacaatctgaccgtccagtcgac
actaaccaggctaaacccgctacaccgacagagaaattgtctccagcgccaaaaccagaa
gctacaaaattagcttgggtgcccaacgaaaacaaagtgccagagcctgcagtcaatact
cctactcagcaagcaaaaaccttccctcccaccgcgtcagccaatacgatcgcggccgct
gcggctaaggtacagccgacgctcagcaaacccactaagggcccggctccgccattcact
ggaggcaaacaacctcctaagccctccgtgccccagacggtcgtcccagtacagcaggct
gtgtcaacgccgaaagctccatttggaaatcgccaaaagcgcgagtcgggtcccgctaat
cgctccccgtcgaatgagacccccgaatcagaaagggtcgctatcgctacagagcatgtc
aaacgcgagccccctctacctcctagtaaagcacctatgcctatctcgataaccctgcac
tcgcaaggtcaaccattgatagtgaccaataaatctccatttgggcactctaggaaagct
gcggtggcaccagagccggccccagtaccgcagcctcccccacccgctcctacagcgtct
gatttcccccctccacccacaccacgaaaccgcggggaacctgttcccccgccggtagta
cagccgcaaccacagccggccccgggcaagtcctgggcgagcctgttctccagcaagact
tcaataactactgccgccccagtgtctgcgcccgctactgaagagccatcttccccgacg
accactactcctatcgcggcaccgaacgttcaaaaaccggttgctaaggttccccctttt
gatgcttctccactgcaagctaccgtcgtcgaaaagccatcaccccctcttcgtccgccc
acgactacagcggcgccgactatatcttactctgagaagacgtcggttaacgccgtcagt
aatgtagctgcgccggtgccagcgaagactccacctagcaaccagtctccggcggagact
cgtgagggccagaaagaggttacgccggcattgcctctgccgccgtcgccgttcagcgat
gatccgaactcgtacaggatgggagaattcctattgaaataccaactagacaatcgttcg
gtgtcgctgctgcctcgcggtttgaccaaccgctcaaactattgctatgtgaactctatc
ctacaagcgttggtagcttgcccgcccttctacaatatgctgaaggcgttaccttatcag
atgaggcgtggcaaatctagtactccagttattgattcgctcgtggagctgtgctactcg
ttcagcgcggcggcgccggcgcgcgcgcgggcgcgggcggagggcgcgtcgccgccgccg
gtgccgggcgcgccgccgctggagggcggcgcggggctgcgcgtgctgcgcgcgctgcgc
ccgctcgcctcgcacgagggccgccaggaggacgccgaggagttcctgggctgcctgctc
aactcgctcaacgacgagatgctcgagttgataaaattggtggagcccgaagaacctaaa
gatggtgcagggcaacccaatggtgtgatcccacaggaacaaccggaggaagatgacgac
gatgatgaatggaaggtgatgggcccgcgcaaccgcggcgcggtggagcggcgctggagc
gcgcgccgcacgcccgtggccgacatcttccgcggccgcacgcgcgtgcgcctgcaccgc
gccggccaccacgacgtcaccgacgccgtgcagcccttcttcacgctgcagctcgacatc
gagcgtgcgagcagtgtgaaagacgccttagagctcttggctaacaaagacaccctggag
ggagtgtctgatgcatggcagcagttatccttggaacagcttccggtgatccttctcctg
catttgaaatgcttccaactggacccggaaggtcacacggcgaaaatcgtcaagaatatt
gacttcagtatagatctcaaaattgatccaaaaataatgtcgtcaaaagtgaagtacacg
tctaaacagcggcagtacaagctgtttgcagtggtgtaccatgagggcgtggaggccgtc
aaaggacactacgtcacggatacttaccatggtcaagtgggctggatacggtatgatgac
tctactgtgacccaagttggggaatcccaagtgctaaagccgaaacctccccgtatgccc
tacctcctcatgtatcgaaggcaggacaccctgccaataccacaccgccccaaaccggag
tga
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