Amyelois transitella (navel orangeworm): 106135070
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Entry
106135070 CDS
T09957
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106135070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atra04131
]
106135070
Membrane trafficking [BR:
atra04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
106135070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
Beta-prop_LRRK2
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
106135070
NCBI-ProteinID:
XP_060802383
LinkDB
All DBs
Position
11:complement(join(5156592..5157736,5157856..5158048,5160141..5160311,5160497..5160702,5161056..5161209,5162018..5162141,5165958..5166289,5166733..5167542,5170289..5170471,5170581..5170670))
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AA seq
1135 aa
AA seq
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MDLLKTPSVQSLLDSDLESVDSLQYLDIEELDEVEYALPASEAPTLAEVLLSDEVEDQQS
KLVRPVEEFDACSALQVDFLQALSQQLVQAQERSSTGVVTTLGVAKDGRLTVGTAHGHLL
SFFEQILRWVCDSNADCGAVSCLSYNSDATRLLAGYARGLICQYESTKGLLLRRVTLGGE
IWGILRVTWAGTAGLALDTGGSVWLIKFSRPLGVRSARTSCLFSGARGEVVAMKARDARI
LALATLSRVIIVAGGRAAGVRLGGPPDTLPVLEWCETDPRILICARSITLQWLSVNITGS
SIALLPIKRAELKTTPLWLGWLGGSLAIFDSDENLRLWGDDYSQPLDLSHIEPVYASAFF
KGVWTDGRVSRAMCTAGVSALGGACVADSALALLGRRGIVRVRPRDMLARVHALIRSGYH
LQALKLLELANSGDAENEAKDFINHLAQRPNILGNKKVADQVIKLCLKYNLREELWCTLW
EQCSSENAFVEALGDAVVMCKLTDIAPAPDATQQLIERLADFEPGLVERVIASLPLTSLD
PHRASVFAREKKLWRAVGAVAAALGGSSGAMRSLVAHVSQSCGGGAACACAGAALVLAAA
DALAGRGAGGRPLPDHARPSARHDALHTLLADESGVEGRSPLRVLVEHDAAAAVRLLEQS
ALEPPFTGPLGKQNRLRIARALLAFTPLLEAENARVEVLEFITGQLSSGSLPSDAEVLSG
ALQLALRGSGERADRAARALLLRRRDSQLTGELSEQLKARSRVLWWLEAQLGRQKNALEH
FFKIETPSGTDLDELFEYVRTCTCDDGELFAKFSADERIFFFCTLVKLRPCAAAALIDDD
DSTYIVAVFNMLSGEGILEFGNSLLKSGRLRGDAAAAHLRNLCTTRPGEVKEFLTHNPGI
VRPEDALAIVRETKVEDAEADCLEANGDFEAALETLLRRLEASDDDEAVTAFAARAGALC
ARAAAALPRVAAAALWDTLLRRAPALPPAALLEAAAYLPVDTLVSRTCDSTRAALTLAAC
ADTRRRGWQCASRIAGREAHAALARALGAAGRGLPVRGRCVRCGRRLASEAVRTQHCARA
VHASCTPEPTCGACGARVPADVAVLPARPPRRVSPPSEHTLVLLAPPRPDLEGII
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatttgttaaaaactccttctgttcagtctttattagactcagatttagagtctgtt
gatagtctgcagtatttagatatcgaagagttggatgaagtggagtatgcattgccagca
agtgaagctccaactctagctgaagtattactaagtgatgaagtagaagaccagcagtct
aaattagtcagacctgtggaggaatttgatgcttgctccgctttacaagttgatttttta
caggcactatctcagcaacttgttcaagctcaggaaagatcatccacaggtgtagtcaca
actcttggtgttgcaaaagatggcagattgacagtagggacagctcatggacatctcttg
tcattttttgaacaaatattacgatgggtttgtgattcaaatgcagactgtggagcagtt
tcctgcttgtcatataatagtgatgctacacgccttttagcgggatatgctcgagggctt
atttgtcagtatgaaagtacaaaaggattactgctgagaagggttactttaggaggagaa
atatggggcatattaagagtgacttgggcaggcactgcaggtctagcactcgatacgggt
ggctctgtttggcttattaagttttcacgacctctaggagttcgatcagctcgtacttcg
tgcctcttttcgggagctagaggagaagtggtagccatgaaggctcgcgatgcgcgcatt
ttagctttggccaccctctcaagggttatcatagtggcgggtgggcgtgcggcgggagtt
cgtctcggtggtccacccgacactctgccagtgctagaatggtgtgaaacagatcccagg
atacttatttgcgcacgttcaataacattgcaatggttatcagtaaatattactggctca
tcaatagctcttctgccaataaaacgagcggaattaaaaactacaccattgtggctggga
tggctgggcggaagtttggctatttttgattctgatgaaaatcttcggttatggggagat
gattatagtcaaccactagatctttctcatattgaacctgtttatgcttcggcttttttc
aagggcgtatggacggacggtcgcgtctcccgcgctatgtgtacggctggcgtgagcgcg
ctgggcggcgcgtgcgtggcggacagcgcgctcgcgttgctcggccgccgcggcatcgtg
cgcgttcgaccgcgcgacatgctcgctagagtacatgcgctcatacgttctggatatcac
ctgcaagcactcaaactactcgagctcgcgaacagtggcgacgcggaaaatgaagcgaaa
gatttcattaaccatttggctcagagaccaaatatattgggaaataaaaaagtggccgat
caggtcatcaagctgtgcttgaagtataatttgagggaagagctttggtgcacattgtgg
gagcagtgttctagcgaaaacgcatttgtcgaagccttgggcgacgcagttgttatgtgc
aaactaacagatattgctccagcccctgatgctactcagcaattaatagaacgcctggct
gacttcgagccgggtctagtagagagagtcatagcttcgttgccgctcacgtccttggac
ccgcaccgcgccagcgttttcgcaagagaaaagaaactgtggcgtgccgtgggagctgta
gccgcggcacttggcggcagcagcggcgcgatgcgttcgctagtggcgcatgtgtcccaa
tcatgtggcggcggcgcggcgtgcgcgtgcgcgggcgccgcactcgtgctggcggccgcc
gacgcgctggcgggccgcggcgccggcggtcgcccactgcccgaccacgcgcggccctcc
gcccgccacgacgcgctgcacacgttgctggctgacgagtcaggtgtagaggggcggtcc
cccttacgcgtgctggtggagcacgacgcggcggcagccgtgagactcctggaacagagt
gcactagagccgccgttcacggggccgctcgggaaacagaaccgactgcgaatcgcacga
gcattactggcattcactccgctattagaggccgagaacgcacgtgtggaagtgctagag
ttcataacggggcagctaagtagtgggtcgctgccgagcgacgccgaggtgttgtctggc
gcgttacaactcgcactgcgcgggagcggcgagcgagctgaccgagcggcgcgagcgctg
ctactgcgacgccgcgactcgcaactcactggagaactctcagaacagctgaaagcgcga
tcgcgtgtattgtggtggctcgaagctcagctcggacgacagaaaaatgcgctcgagcac
ttcttcaaaatcgaaacaccgtccggcaccgaccttgatgaattgttcgagtatgtccgc
acatgtacctgcgacgatggtgaactatttgctaaattttctgctgacgagcgaatattt
ttcttttgtactctcgtcaaactacgcccgtgcgctgctgcggcgttaatcgacgacgac
gactcgacttacatcgttgcagtttttaatatgttatccggcgaaggtattctcgaattt
ggcaattctttgctcaagtctgggcgacttcgtggcgacgccgctgctgcccatcttcga
aatttgtgcacaaccaggccgggcgaggtgaaagagtttctgacacacaatccgggaatc
gtccggccggaggatgcactggctattgttagagagactaaggtcgaagacgccgaagca
gactgtctcgaggcgaacggggattttgaggcggcgctcgaaacgctcctgcgaagactc
gaggcgagcgacgacgacgaggcggtcaccgcgttcgccgctcgcgcgggggcgctgtgt
gcgcgcgccgcggccgccctgccgcgcgtcgccgccgccgcgctctgggacacgctgctg
cggcgcgcgcctgccctcccgcccgccgcgctgctcgaggcggccgcctacctgcccgta
gacacgctggtgtcgcgcacgtgcgactccacgcgcgcagcgctcaccttggcggcgtgc
gcggatacgcggcggcgcggctggcagtgcgcgtcgcggatcgcgggccgtgaggcgcac
gcggcgttggcgcgcgcgctgggcgcggcgggtcgcgggctgccggtgcgcgggcgctgc
gtgcgctgcgggcggcggctggcgagcgaggcggtgcgcacgcagcactgcgcgcgcgcg
gtgcacgcgtcgtgcacgccggagcctacgtgtggcgcgtgcggcgcgcgcgtgccggca
gacgtggcggtgctgccggcgcggccgccgcgccgggtgtcgccgccgtcggaacataca
ttggttttactggctccgccgcgtcccgatctggaaggaataatatga
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