Amyelois transitella (navel orangeworm): 106135087
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Entry
106135087 CDS
T09957
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106135087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atra03009
]
106135087
03016 Transfer RNA biogenesis [BR:
atra03016
]
106135087
03029 Mitochondrial biogenesis [BR:
atra03029
]
106135087
Enzymes [BR:
atra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
106135087
Ribosome biogenesis [BR:
atra03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
106135087
Transfer RNA biogenesis [BR:
atra03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
106135087
Mitochondrial biogenesis [BR:
atra03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
106135087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
GCV_T_C
Motif
Other DBs
NCBI-GeneID:
106135087
NCBI-ProteinID:
XP_013190733
LinkDB
All DBs
Position
11:complement(join(4460367..4460669,4460825..4461100,4461186..4461547,4461708..4463103))
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AA seq
778 aa
AA seq
DB search
MEKNEFDSTLGGSEQLPDSANSLKFAASRSIEIAAMTESILRPSKTKLIFQSLPVHMRRR
VMSHNCKRLPRKLRQGHLEQLKKSGLPPKLKRPSRKYRRRPGNLLQEYNRRQRRTKWLET
HIWHAKRFHMIEKWGHRLAYAPCDKAFRACYRATSAHCLIQDISYFTPIQISGSTDVIKK
LFSSITNPTCGLSICAKAFISGNREGTISLYKPNQFPFGYIGKANFIWLPGETEKNVWLF
VHPSQTKEVESVLTDIICNKSHNNEEYVPSQKQRKLNNSIAENINIKLNPGAYNIFRLTG
PNSHAILARSLKCVESIEKVATNKWISKVDGKSLHLTEKQCYWQSISKVSSPSQLPSRII
IGLIVKDPRLSRPAQRTKANNNSHETVNIESLITVPTTASLSPIWDLSLQDIIKKEKLSN
SQFIEHVTKTQLVPGSVNEDDPKLQCVPVVLVQRPGSQDACGKKIGYSSGWDIIIPSGYG
MQFWQTFIMFGARAGGLRETESLAFELGETYLPPDSYAGEEEQKKIECDLKDKYFRLPPS
KRVNYIKLGINSPFTCNWKLLLKEWCNVPIERFNVIRDRQILSKLQDCLKNKQKLPEIEN
SAACLVAVYLQMASAGSLKRHALICLPEKSDMISIKTLNEPKHEDPNEKLRKQTRKQHKI
EIKRWRRNRIKLRNKNKMVQPMKPSKRDNHIPSDYVLKMRELWLPSAIKTVRHSCSRQIL
GFITQGAFSFSEAKSCGVGYIAYNALNTLVMNGHNQVLVRNVSSKKYRISNVHIIKNV
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaatgaatttgactccacattgggtggttctgaacaactaccagattcagcc
aacagtctgaaatttgcagcatccagaagtattgaaatagcagcaatgactgagagcatt
cttcgtccaagcaaaactaagctcattttccaatctttgcctgtacatatgcgacgccgg
gtaatgagccacaattgtaaaagattgcccaggaaactgcgccaaggacatttagagcag
ttgaaaaaaagtggtttgccgcctaaactaaaaaggccttctaggaaatataggcggcgt
cctggaaatttgttacaagaatataacagaaggcaaaggagaactaaatggttagaaact
catatttggcatgccaaaagatttcacatgattgaaaagtggggacatcgattagcatat
gcaccatgtgacaaagcattcagagcctgttacagagcaacctcagctcactgccttata
caagatatttcttactttactcctatccaaattagtggttcaacagatgttataaaaaaa
ttgttctcttccattacaaatcccacatgtggtttgagtatctgtgcaaaagcatttata
agtggtaacagagagggtactattagtttgtataaaccaaaccagtttccatttggatat
attggtaaagcaaattttatatggttgcctggtgagacagaaaaaaatgtctggcttttt
gtgcatccatcccagacaaaagaagtagaatcagttttgactgatattatttgcaataaa
agtcataataatgaggaatatgtacctagtcagaaacaaaggaagttaaataatagcatt
gcagaaaatataaacattaaactgaatccaggtgcttacaacatattcagactaacaggc
ccaaacagccatgcaatacttgctcgtagtttaaaatgtgtagaaagtattgaaaaagta
gcaacaaataagtggatttcaaaagttgatggaaaatctttacatttaactgagaagcag
tgttattggcaaagtattagtaaagttagttccccatcacagcttccatctagaataatt
attgggttaattgtgaaagatcccagactaagccgtccagcccaacgaacgaaagctaac
aataacagtcacgaaactgtgaatatagaatcattgattactgttccaacgacagcatca
ctatcgcctatttgggatttgagtttacaagatataattaagaaagagaaattaagtaat
agtcaatttatagagcatgtgacaaaaacccagttagtgcctggatctgtgaatgaggat
gatcccaaattgcagtgtgtgcccgttgttctggtacagagaccgggatcacaggatgca
tgtggaaagaaaattggatacagcagtggctgggacataataataccatcaggttatggt
atgcaattctggcagactttcatcatgtttggagctcgtgcaggcgggctccgagaaact
gagagtttagcttttgaattgggcgaaacatacctacctccggattcttacgcaggtgaa
gaagaacaaaagaagattgaatgtgacttgaaagataaatattttaggctgcccccaagt
aaaagagttaactacataaaattaggaatcaatagtccattcacttgcaactggaaatta
ttgttgaaagaatggtgcaatgtgcctattgagagatttaatgtgataagagataggcaa
atactttcaaagttacaggattgcttaaaaaataagcaaaaattaccagaaatagaaaat
tctgcagcatgtttggtagctgtttacttacaaatggcatcagcaggatctctaaagcgg
cacgcccttatttgtttgccagagaaaagtgacatgatctcaataaaaacattaaatgag
cccaaacatgaagaccccaatgagaagttgagaaaacaaacaagaaaacaacacaaaatt
gaaataaagcgttggagaagaaatcgaataaaattaaggaataaaaataagatggtacaa
cccatgaagccttcgaaaagagataatcatataccatctgactatgtgttgaaaatgcgc
gagttatggcttccaagtgcaatcaaaactgtgcgacattcttgctccagacaaatactg
ggatttatcacacaaggtgcattcagcttctcagaggctaaaagttgtggcgttggttac
attgcttacaatgctttaaatacactagtaatgaatggccacaatcaagtcttagttcga
aatgtgtcctcaaaaaaatataggataagtaatgtacatataataaaaaatgtctaa
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