Amyelois transitella (navel orangeworm): 106135150
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Entry
106135150 CDS
T09957
Name
(RefSeq) netrin-B
KO
K06843
netrin 1
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
atra00536
]
106135150
Glycosaminoglycan binding proteins [BR:
atra00536
]
Heparan sulfate / Heparin
Axon guidance molecules
106135150
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GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
NTR
EGF_LMN_ATRN
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
106135150
NCBI-ProteinID:
XP_060802489
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All DBs
Position
11:complement(join(1950178..1950328,1950852..1951038,1951813..1951887,1953463..1953525,1961137..1961286,1966087..1966275,2101036..2102056))
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AA seq
611 aa
AA seq
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MLPRAVTLLAAATLALTAAPPDPCYEEGRPKRCIPDFVNAAFGATVVASSTCGKRGPEQL
CDPPGDQDPDNACRICDAARSDRKHPPTHLTDLNNPHDVTCWRSAALPPASYNSPRDNVS
LTLSLGKKYELTYVSLQFCPKAARPDSVAVYKSADYGVTWQPFQFYSSQCRQAYGKSNRA
TVTAANEQEARCSDSHRLAGDSSAGARLAFSTLEGRPSAANFDVSPVLQDWVTATDVRVV
FDRLHMVNEGDEIDSKKQAAPGTQHYAVSDFAVGGRCKCNGHASRCIPMKAGEVSSVGGV
QQLTCECRHNTAGRDCERCKPFHFDRPWGRATARDANECKECNCNGHARRCRFNMELYKL
SGRASGGVCLKCRHYTAGRHCHYCREGYYRDPTKPITHKKACKPCDCHPVGASGKTCNQT
SGQCPCKDGVTGTTCNRCAKGFQQSRSHIAPCIRIPRVVTAVQAMEAVDGEPARAADQCG
RCRAGARTLNLNKFCSRDYVIMGKVVGREASAGAASGWVRLSLSVQAVYKRGIRSRLRRG
GTALYVRAADLACKCPKLKINKSYLILGVEKEGSSLGLPGLTVGDRTLMLEWRDDWHRRI
RRLQRRAINCH
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgctgccccgcgcggtgaccctcctcgccgccgcgacgctcgccctcaccgccgccccc
cccgacccctgctacgaagaaggacgccctaaacgatgcatccctgacttcgtcaacgcc
gccttcggagccaccgtcgtcgcttcctccacctgcggcaagagaggccccgaacaactc
tgcgaccccccaggagatcaggaccccgacaacgcctgcaggatctgcgacgccgccaga
tccgaccggaaacacccccccacgcacctcaccgacctcaacaaccctcacgatgtcacc
tgctggagatccgccgctctgccacccgcctcctataactcccctcgtgataacgtctcc
ctaaccctttccctcggaaaaaaatacgaattgacctacgtcagcctccagttctgcccg
aaagcggctcgtccggattctgttgcagtttacaaaagtgccgattacggtgtgacatgg
caaccgtttcagttttactcgagtcagtgcaggcaggcgtacggaaagtctaacagagct
acggtgaccgccgccaacgagcaggaagctagatgctccgactcccataggttggccggc
gacagtagcgctggtgctcgattagccttcagtaccctggaaggtcgtccgagcgcggct
aatttcgacgtatcccctgtgctgcaagactgggtgacagctacggatgtaagagttgtg
ttcgatcgtctgcatatggtgaatgagggggatgagattgattccaaaaagcaggcggct
ccggggacgcaacattacgccgtgtctgatttcgctgtgggcggtcgatgcaagtgcaat
ggacacgcgtcgcgatgcattccaatgaaggctggtgaggtgtcgagcgtcggcggggtg
cagcagctgacctgcgagtgcagacacaataccgccgggagggactgcgagagatgcaag
cccttccacttcgacaggccctggggacgcgccacggcgagggacgccaacgaatgcaaa
gaatgcaactgcaacggccacgcgcggcggtgccgattcaacatggagctatacaagctg
tccggccgggctagcgggggcgtttgcctgaaatgccgacactacacggcgggcaggcac
tgccactactgccgggaaggctactaccgcgacccgaccaaacctatcacgcataagaag
gcttgcaaaccttgcgactgccacccagtgggagcgagtggaaagacctgcaaccagacg
agcggtcagtgcccctgcaaggacggcgtcactggtaccacctgcaaccgctgtgccaag
ggcttccagcagtccaggagccatatcgcgccttgcatacgtattcctcgcgtggtgacc
gcagtgcaggccatggaagcggtggacggcgagccggcccgcgcagcggatcagtgcggg
cggtgccgcgccggcgcacgcactctaaacctcaacaagttctgcagccgagactacgtc
ataatgggcaaggtagtggggcgcgaagcgagcgccggcgcagcgagcgggtgggtgcgt
ctctctctgagcgtgcaggcggtgtacaagcgcgggatcaggagccgcctgcgccgcgga
ggcaccgccctctacgtgcgcgccgcggacctcgcctgcaagtgtcctaagctcaagatt
aacaagtcatacctaatcctaggagtggaaaaggaggggtcttcattgggcctgccagga
ctcacagtaggcgatagaaccctgatgctggagtggcgcgacgactggcaccgccgcatc
cgacgtctccaacggcgcgccatcaactgccactag
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