KEGG   Amyelois transitella (navel orangeworm): 106135165
Entry
106135165         CDS       T09957                                 
Name
(RefSeq) U6 snRNA phosphodiesterase 1
  KO
K23093  U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:atra03041]
    106135165
Spliceosome [BR:atra03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    106135165
SSDB
Motif
Pfam: HVSL 2_5_RNA_ligase2
Other DBs
NCBI-GeneID: 106135165
NCBI-ProteinID: XP_013190847
LinkDB
Position
11:join(5090166..5090251,5090598..5090740,5091425..5091608,5092196..5092358,5093157..5093339)
AA seq 252 aa
MSALSYLCEYESNSEDSDCDNKNTSDVKKIKLHVPDLSDIVVAPRDTYKDNPEVHGYRIR
SFPHERGNWASFVYVKYPDVEFFNILIDKLQKELCCIEESWQPCEDIHISLSKTFILKYH
LITPFTSSLQKIVSDTDCFDLAFDALKVYCNEEKTRTFVALEVDYFCNKHLTKLSQKIDE
VLKEYKLPKFHDSPSFHASLLWINGNKKTELKNNLENLNIILKQHLHEYSKTTCISRVNC
KIGNKYFQYSFQ
NT seq 759 nt   +upstreamnt  +downstreamnt
atgtctgcattgtcttatctatgtgaatacgaatctaattcagaagatagcgattgtgat
aataagaacacttcagacgttaaaaagataaaattgcatgtacccgacttgagtgacatt
gttgttgcacccagagatacctacaaggacaaccctgaggtgcatggatatagaatacgg
tcatttccacatgaaagaggaaattgggcttcttttgtatatgttaaatatccagatgta
gagtttttcaacatattaatagataaactgcaaaaagagttgtgttgtattgaagagtct
tggcagccatgtgaggatatacacataagtttatcaaaaacttttatactaaaataccac
ttaataacaccatttacctcatctcttcaaaaaattgtatctgatacagattgtttcgat
ctcgcatttgatgcattaaaagtatactgcaacgaagaaaaaacaaggacatttgttgct
ttggaggtggattacttctgtaacaagcacctcacaaaactctcccaaaaaattgatgaa
gttttaaaagagtacaagttacctaaattccacgatagtccatcatttcatgcaagctta
ttgtggatcaacggaaacaagaaaacagaacttaaaaataatttagaaaatttaaatatt
atcttaaaacaacatctgcatgaatatagtaagactacttgcatcagcagagttaactgc
aaaataggtaacaaatactttcaatattcattccaataa

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