Amyelois transitella (navel orangeworm): 106135171
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Entry
106135171 CDS
T09957
Name
(RefSeq) ATP-dependent DNA helicase Q4
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atra03032
]
106135171
03400 DNA repair and recombination proteins [BR:
atra03400
]
106135171
Enzymes [BR:
atra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
106135171
DNA replication proteins [BR:
atra03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
106135171
DNA repair and recombination proteins [BR:
atra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
106135171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
zf-CCHC
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106135171
NCBI-ProteinID:
XP_013190854
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Position
11:complement(5216015..5219869)
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AA seq
1284 aa
AA seq
DB search
MDIIESIKKDKAYLKCKLIVKSWEKDFKTNHARTPSKFDIKEAPSTIKYAYKKYFQLKSA
ALENSLCIDDFEEKVKDTTPEPTRHFESLSYESLSSQTDPVLPELPTGREIQKLLSNIEE
PHISVKESTPFTENLSKKLFQHRKFSIRNPRKNTHHQSKSQPTFENFQSSEYEKENSFLS
NSMQISPKKDTSLKLVTVDQELQNKQVSSVSNIIQNIPKVRQINTAWLERIMGSPVTKEI
EESCEKFGISNVKVSTTETESIDKKEFQFIEHEQEKLGDYVENSESEEEDNITLDKLKPA
LKKRKISQNVSTNIVSQNNDKNEISMDNIKTKQTSSVKDHRNKRKPKTKNDLNDNALQPP
DISEFLPFGKEDDVAPRHGKISNILEKYNSPVKIHKTLTKKSEPNEVNKLESKIKNGTLN
DNFVKINIEKKVFVRGKKNINYSKFKKQQWKDKKALHSGMEFPESGKITCFKCGSAGHMA
RYCTAHRGDSLLPLESYSDNTLPSLEDMQNIVSKENKNVSLTEQFSESLFKASKIPESVL
EMLASPGNCSNINIKPIYSVYSEETPEEMNEALQKFGHNKFRPGQEEAIKRILCGMSTLL
ILSTGGGKSLCYQLPAYIYSRYYKCITLVISPLVSLMEDQVLSMPEFLKAGCLHTNQPPT
QRRKIIQCLKDGEINILLVSPEALISGDSSNGFTGLFKSLPQIAFACIDEAHCVSQWSHN
FRPSYLMISRVLREKLNVNCILGLTATASQPTIKSVISHINIPDGLSGVITSPTLPENLI
LSVSFEKDKDRALINFLTSERISLFNSVIVYCIRRDECERIAAVLRSCLQEPNKISMEKQ
SKKRKRMSYIAEAYHAGMSAAQRKKIQKHFMEGTLRIIVATVAFGMGINKSDIRCIIHYN
MPSSFESYVQEVGRAGRDGQNAYCHVFMNNSDSDKNELLKHIHANTTDRPTIRKLIQKLF
ISCDCQNQGATTSKYSNQKRCKGHEVGIPIDSTVEELDLPAENIATLLCYVELHPKKYIK
VLNNAYTLCKIASYGGPVKLLEAAKTSAPLAMAYLMESKNDPDIMNKSVIEFNVIEVAAA
IGWESGMTKYYLKNLEWTTEGGLSKRSLLKVEFSVLGFRIKAPGDLDPTELDTILDDLHK
LVLSQEQSMLFQLEEINKALSTLGNYSLEGKDLSEELLLQKSDALKIIIKDYFQRDSILP
SNVTLEERPIDVDRVASDVRALVASYKDCSFTGRSVARIFQGISSPNFPAIVWGRCKFWR
SHIQEDFYGILKIATEQLIQMKII
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggatatcatcgaatcaataaagaaggacaaagcttatcttaaatgtaaattaatagta
aaatcttgggagaaagacttcaaaacaaatcatgctcgaacgccatctaaatttgacatc
aaagaagctccatcaacgatcaaatatgcttataaaaaatattttcaacttaagagtgca
gcccttgagaattcactatgtattgatgattttgaagaaaaagtaaaagatactactcca
gaacctacacggcactttgaaagtctgtcctatgagtccttaagttctcaaacagatcca
gtacttccagaattacctaccggtcgagagatacaaaaactactttctaatattgaagag
ccccacatatcggtcaaagaatctactccatttactgaaaatctatcaaaaaagttattt
caacatagaaagttttctataagaaatcctcgcaaaaatacacatcaccaatccaaatca
caacctacttttgaaaactttcaaagtagtgagtatgaaaaagagaattcttttctctct
aattctatgcagatatctcctaaaaaagatacaagtttaaaattagtaacagtagatcaa
gaattacaaaataaacaagtcagctctgtgtctaacattatccaaaatatacctaaagta
agacaaattaatacagcatggcttgaaagaattatgggttcaccagttacaaaagaaatt
gaggagtcatgtgaaaaatttggaataagcaatgttaaagtatcaacgacagaaactgaa
agtattgataaaaaagaatttcaatttatagaacatgaacaggaaaaacttggggattat
gtagaaaatagtgaatctgaagaagaagataacataactttagataaattgaagcctgct
ctaaaaaaaagaaaaatcagccaaaatgtaagcacaaatattgtaagtcaaaataatgat
aagaatgagataagtatggacaatattaaaacaaagcaaacaagttctgttaaagatcac
aggaacaaaagaaaaccaaaaactaaaaatgatcttaatgataatgcattacaaccacca
gacatatctgaatttttgccttttggaaaagaagatgatgttgctcccagacatggaaag
atttcaaatatcttggaaaaatataattctccagttaaaatacataaaacattaacaaaa
aaatctgaaccaaatgaagttaataaattggaatctaagataaagaatggaacattaaat
gataattttgtaaaaatcaatattgaaaaaaaggtatttgtacgaggaaaaaagaacatt
aattattccaagtttaaaaaacagcaatggaaagacaagaaagctttgcattctggtatg
gaatttccagaatccggcaaaattacttgtttcaaatgtggatctgctggtcatatggca
aggtattgtactgctcatagaggagattctcttttgcctttagaaagttatagtgacaac
acattgccatcactagaagatatgcaaaatatagtatctaaagaaaataaaaatgtgtca
ctaacagaacaatttagtgagtctttatttaaagcgagtaaaattcctgaatcagtgtta
gaaatgctggcttctccaggtaactgtagtaacattaatataaaacctatttattctgtt
tattctgaagaaactccagaagaaatgaatgaagcacttcaaaaatttggacataataaa
tttcgcccaggtcaggaggaagctatcaagcgtattttatgtggaatgtccactttgttg
atcttgtctacaggtggcggtaagtctttgtgttaccaacttcctgcatatatctacagt
aggtattataagtgcatcactttagttatttcacctcttgtttccttgatggaagatcaa
gtgctgagtatgccagaatttttgaaggctgggtgtctacacactaatcaaccaccaacc
caaaggcgaaaaattatacaatgtctgaaagatggtgaaataaacatcttgttggtgtct
ccagaagcattgatatcaggtgattcatctaatggctttactggattgtttaaatcattg
ccacaaattgcatttgcatgtattgatgaagctcattgtgtttcacaatggagccataac
tttagacccagttatttaatgatatccagagtactacgagaaaaacttaatgtaaattgt
atactaggcttaacagctacagccagtcaaccaacaatcaaaagtgtaattagtcatata
aatatacctgatggtttatctggagtaataactagtcccactcttccagaaaatttaatt
ctctcagtatcctttgaaaaagataaagatagggccttaataaatttccttacatctgaa
aggataagtttatttaattcagttatagtttattgtataagaagagatgaatgtgaaaga
attgctgctgtattaagatcatgtcttcaagagccaaacaaaatcagtatggaaaaacaa
agcaaaaaaagaaaacgaatgtcatatattgctgaagcttatcatgcaggaatgtctgct
gcgcagagaaaaaaaatacaaaaacacttcatggaaggaacacttagaataattgtggct
actgtggctttcggcatgggtataaataaatcagatatcaggtgtattatacattacaac
atgccaagcagctttgaatcatatgttcaagaagttggtagagcaggtcgtgatggccaa
aatgcttattgtcatgtctttatgaataatagtgatagtgataaaaatgagcttcttaaa
catatacatgctaataccactgacaggccaactataagaaaattgatacaaaaacttttt
atttcttgtgattgtcaaaatcaaggcgcaacaactagtaaatattcaaatcagaagagg
tgtaaaggacatgaagtaggcattcctatagattcaactgttgaagaactggatcttcca
gcagaaaatatagccacattattgtgctatgttgagttacacccaaaaaagtacatcaaa
gtcttaaataatgcttacactttgtgtaaaattgcatcttatgggggtcctgtaaaattg
ttagaagcagctaaaacttctgcccctttagcaatggcatatttaatggagagtaaaaat
gaccctgacataatgaataaaagtgttatagagtttaatgtcattgaggtagctgctgca
attggttgggaaagtggtatgacaaaatactatttgaaaaatttagaatggaccacagaa
ggtggattgtcaaaacgatcccttttgaaggttgaattcagtgttcttggatttcgtatt
aaggctcctggagatttagatccaacagagttagacactattttagatgatcttcacaag
ttggtgctatctcaagagcagtctatgttgttccaattagaagaaattaacaaggctcta
agcacccttggtaattactcattagaagggaaagatctttcagaagaactgttattgcaa
aaatcagatgctcttaaaattataataaaagactattttcagagggatagtattttacca
tcaaatgtcacattagaagaacgtcctatagatgtagatcgtgtggcatctgatgtccga
gcattggttgcttcttacaaggattgtagttttactggtcgtagtgtggcgagaatattt
caaggtatttcgtcgcctaatttcccagcaattgtttggggtagatgtaaattttggcga
tcacatattcaagaagatttttatggcattcttaaaatagcaacagaacaactaattcaa
atgaaaattatttaa
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