Amyelois transitella (navel orangeworm): 106135175
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Entry
106135175 CDS
T09957
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atra03016
]
106135175
Enzymes [BR:
atra01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
106135175
Transfer RNA biogenesis [BR:
atra03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
106135175
Prokaryotic type
Methylthiotransferases
106135175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
TraT
DUF1450
Motif
Other DBs
NCBI-GeneID:
106135175
NCBI-ProteinID:
XP_060802488
LinkDB
All DBs
Position
11:join(1883413..1883590,1884072..1884246,1884711..1884868,1885116..1885382,1886353..1886518,1887542..1887649,1888167..1888332,1889998..1890159,1890552..1890794)
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AA seq
540 aa
AA seq
DB search
MSGVCAEIIDDIEDLISSQDITPKERYASRKNVSVRSKKRDLQKSSEPVEKIILESVVPG
TQTIYVKTWGCAHNNSDSEYMAGLLAAHGYKLTEDKWEAQLWLLNSCTVKSPAEDHFKNE
IDLGRSRGIHVVVAGCVPQGAPRSGYLQGLSVVGVQQIDRIVEIVEETLKGHTVRLFGQK
KTNDGRKAGGASLLLPKVRKNPLIEIISINTGCLNQCTYCKTKHARGELGSYPPEEIVER
ARQSFKEGVVEIWLTSEDTGTYGRDIGTSLPSLLRRLVAELPGGARLRLGMTNPPYILEH
LPDVARVMAHPRVYKFLHVPVQSGSDQVLSDMKREYTVADFERVVDYLREHVPGITIATD
IICGFPTETDEDFKGTLALCDKYRFPSLFINQFFPRPGTPAANMTRVPSQEVKKRTKVLS
DLFRSYEPYGHKVGEIQEVLVTDVSHDRNYYVAHNEFYEQVLIPKEEKYMGKMVTVRITS
ATKFSMMGEPIDKPKMVGISAPLKKGEVSGVKTITKKVPVPLPVIVVLFAVFLRLVWMFL
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagtgtgtgccgaaattatagatgatattgaagatttaatatcttctcaagat
atcactcctaaagagagatatgcaagtcgtaaaaatgtgagtgtcaggtcaaagaaacgg
gatttacagaaatcttcagagcccgttgaaaagatcattcttgaaagtgttgttccaggg
acacaaacaatatatgtgaaaacatggggctgcgcacacaacaactcggactctgaatac
atggcgggactgctagccgctcacgggtacaaactcacagaggacaagtgggaagctcag
ctgtggctgctaaattcctgtacagtgaagagtccggctgaagaccatttcaaaaacgag
atagacctcgggcgtagtcgtggtattcacgtggtagtggctgggtgtgtgcctcagggt
gctcctcggagcggctacctgcaggggctcagcgtggtgggcgtgcagcagattgacagg
attgtggagattgtggaggagaccctcaaaggtcacactgtccgtcttttcgggcaaaag
aaaaccaacgacggccgtaaagccggtggtgcttcactactcctgcctaaagtacgcaag
aatccactaattgagatcatatcaatcaacacgggatgtctgaaccagtgcacgtactgt
aaaaccaagcatgcgagaggagagctgggcagctaccccccggaggagattgtggagaga
gcgagacagtcgttcaaggagggagtggtggagatctggctcaccagcgaggacacaggt
acctacgggcgggacatcggcacatccctgccctcgctgctccggcggctggtggcggag
ctcccgggcggcgcgcggctgcggctcggcatgaccaacccgccctacatcctggagcac
ctgcccgacgtcgcccgcgtcatggcgcaccccagggtttacaaattcctccacgtgcca
gtacaatcgggcagcgaccaggttttgtcagacatgaaaagggaatacactgtagcggat
tttgagagagtcgttgactatctgagagagcatgtaccaggtatcacgatagctacagac
ataatatgcgggtttccaacagaaaccgatgaagatttcaaaggtactttggccttgtgc
gacaagtaccgtttcccgtctctgttcatcaatcagttcttccccagaccgggaacgcct
gctgccaacatgaccagggtgccgagtcaagaagtgaagaagcgtaccaaagtgctgtca
gacttgttcaggtcgtacgaaccgtacggccacaaagtgggcgaaatacaagaagttctc
gtgaccgacgtgtctcacgatagaaactactatgtggcccataacgagttttatgaacag
gtattaattcctaaagaagaaaaatacatggggaagatggtcaccgtcagaataacgagt
gcaacaaaattctctatgatgggagagcccatagacaaacccaaaatggtgggaatatcc
gcgccattgaagaaaggagaagtttccggtgtgaaaacaataacaaagaaagtaccggta
ccgttaccggtaattgtagtgttatttgctgtatttttaagattagtctggatgttttta
taa
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